Haemophilus influenzae 86-028NP (nontypeable): NTHI0546
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Entry
NTHI0546 CDS
T00248
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
hit
Haemophilus influenzae 86-028NP (nontypeable)
Brite
KEGG Orthology (KO) [BR:
hit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hit03009
]
NTHI0546 (srmB)
Enzymes [BR:
hit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NTHI0546 (srmB)
Ribosome biogenesis [BR:
hit03009
]
Prokaryotic type
rRNA helicases
NTHI0546 (srmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AAX87475
UniProt:
Q4QNC2
LinkDB
All DBs
Position
complement(511098..512417)
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AA seq
439 aa
AA seq
DB search
MNLSQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEERDVLGSAPTGTGKTAAFLL
PALQHLLDYPRRKPGPPCILILTPTRELAMQVAEQAEELAQFTHLNIATITGGVAYQNHG
DVFNTNQDLVVATPGRLLQYIKEENFDCRSVEMLIFDEADRMLQMGFGQDAEKIAAETRW
RKQTLLFSATLEGELLVDFAERLLNDPVKVDAEPSRRERKKINQWYYHADSNEHKIKLLA
RFIETEKVTRGIVFVRRREDAREVSETLRKRGIRSAYLEGEMAQTQRNNAIDKLKSGIVT
VLVATDVAARGIDIDDVSHVMNFDLPYSADTYLHRIGRTARAGKKGTAVSFVEAHDYKLL
GKIKRYTEEILKARILAGLEPRTKPPKDGEVKSVSKKQKARIKKKREEKKKTEAKKKVKL
RHKDTKNIGKRRKPSNSNV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatcccaatttgaacaattcgatctttctccagaacttttaaaggcacttgag
aaaaaaggttattcccgcccaacagctattcagatggaagccattcctgccgcaatggaa
gagcgtgatgtattaggctctgcaccaacgggaacagggaaaaccgctgcttttttatta
cctgcgctacaacatttattggattatccacgccgtaaaccagggccaccgtgtattttg
atattaacaccaacccgagaactggcaatgcaagtggctgaacaagcggaagaattagcg
cagttcacccatttaaatattgcgacaattacaggtggtgtggcgtatcaaaatcatggt
gatgtattcaataccaatcaagatttggtggtggctacgccaggtcgtttattgcaatac
attaaggaagaaaattttgattgccgttccgttgaaatgctgatttttgatgaagccgat
agaatgttacaaatgggatttgggcaagatgcggaaaaaattgcagctgaaacccgttgg
cggaaacaaactttgttgttttctgcaaccttagaaggagagttattggtcgattttgcg
gagcgtttgttgaatgatcctgtgaaagtagatgcggaaccaagtcgccgtgaaagaaaa
aaaatcaaccaatggtattatcacgcagacagcaatgaacataaaatcaaattgctcgcg
cgttttattgaaactgaaaaagtaacccgtggaattgtatttgttcgccgtcgtgaagat
gcgcgtgaagtttctgaaacattgcgtaaacgaggcattcgttccgcatatttagaaggc
gaaatggcacaaactcaacgtaacaatgccattgataaattgaaatcaggtattgtgacg
gtattggttgcaacagatgtggctgcgcgtggtattgatattgatgatgtaagccacgtg
atgaattttgatttgccctatagtgcggatacttatttgcatcgaattggacgtaccgcg
cgagctggcaaaaaaggcacggcagtctcttttgtcgaagcgcatgattacaagttgcta
ggtaaaatcaaacgttatactgaggaaattttaaaggcgcgcattttagcaggtttagaa
cctcgcactaagccaccaaaagatggcgaagtgaaatctgtcagcaaaaaacaaaaggca
cgcattaaaaaaaaacgtgaagaaaagaaaaaaacagaggcaaagaaaaaagtaaaattg
cgtcataaggatacgaaaaatatcggcaaacgacgcaagccaagtaacagtaatgtttaa
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