Haemophilus influenzae 86-028NP (nontypeable): NTHI0887
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Entry
NTHI0887 CDS
T00248
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hit
Haemophilus influenzae 86-028NP (nontypeable)
Pathway
hit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NTHI0887 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hit03019
]
NTHI0887 (recQ)
03400 DNA repair and recombination proteins [BR:
hit03400
]
NTHI0887 (recQ)
Enzymes [BR:
hit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NTHI0887 (recQ)
Messenger RNA biogenesis [BR:
hit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NTHI0887 (recQ)
DNA repair and recombination proteins [BR:
hit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NTHI0887 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
HEM4
Motif
Other DBs
NCBI-ProteinID:
AAX87781
LinkDB
All DBs
Position
848755..850614
Genome browser
AA seq
619 aa
AA seq
DB search
MLDSPLPSKIIEKPTALSVLKSVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCY
QIPALCFDGLTLVISPLISLMKDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLISGQLK
LLYVSPEKVMTNSFFQLISYSKVCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPI
MALTATADYATQKDILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKPMEQLTRFVLAQKGK
SGIIYCNSRNKVERIAESLRNKGVSAAAYHAGMETAIRERVQQDFQRDNVQVVVATIAFG
MGINKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWLQKILFEKPE
TPQRQIEQHKLEAIGEFAESQTCRRLVLLNYFGEHRQTPCNNCDICLDPPKKYDGLVDAQ
KVMSTIYRVGQCFGAHYVIAVLRGMHNQKIIERQHHKLSVYGIGKDKSKEHWQSVIRQLI
HLGFVQQVISELNPTLQLTESAKVILKGEEPLELAMPRISSISKIAHNPQRQGVANYDKD
LFARLRFLRKQIADKENIPPYIVFNDATLQEMAQYMPTSNIEMLQINGVGSIKLERFGQP
FMALIQEHKAILANAQNND
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgctggattctcctttaccatcaaaaataatagaaaaaccgaccgcactttctgttttg
aaatcggttttcggttatcaatctttccgtaaagggcaggaagaagttattaatgctgct
ttaaatggacaagatgcgttggtggtaatggcaacggggaatggcaaatcgctttgttac
caaattcccgcactttgttttgatggtttaactttagtgatttctccgctgatttccttg
atgaaagatcaagtggatcagctgcaagctaatggaattgaggcggattttcttaattct
agtcagactttagaacagcagcaacaagtacaaaataagcttatttctgggcaacttaaa
ctactttatgtgtcgccagaaaaagtgatgacgaacagtttctttcaacttatttcttat
agcaaagtctgctttattgcgattgatgaagcacattgtatttctcaatgggggcatgac
tttcgccctgaatatacccagcttggcggtttaaaagccagtttccctgatgcgccgatt
atggcacttacggcaacggcagattatgcgactcaaaaagatattctgcggcatcttaat
ctgaaaaatctgcacaaatatattggtagttttgatcgaccaaatattcgttataccttg
gaagaaaaatacaaacctatggagcaactgacacgttttgtgttggctcaaaagggtaag
agtgggattatttattgcaacagcagaaataaggttgagcgaattgcggaaagtttacgc
aataaaggtgtctctgctgctgcttaccacgcaggaatggaaacggcaattcgtgaacgt
gtgcaacaggattttcagcgtgataatgttcaagtagtagtcgcaaccattgcttttgga
atggggattaataaatccaatgtgcgctttgttgcccattttgatttaccacgtagcatt
gaatcttactatcaagaaacaggtcgagcaggacgtgatgatttgcctgccgaggcggtt
ttgttttatgaaccagctgattacgcttggttacaaaaaattctcttcgaaaaaccagaa
acgccacagcgtcagattgagcagcataaattagaagctattggggaatttgcggaaagc
cagacttgtcgccgtttagttcttctcaattattttggcgagcatcgacaaacaccatgt
aataactgtgatatttgccttgatcctcctaaaaaatatgatggcttagtcgatgcgcaa
aaagtaatgtctactatttatcgagtgggacaatgttttggtgcacattatgtgattgcg
gtgttgcgtggcatgcacaatcagaaaattattgaacgccaacaccataaactttcagta
tatggcattggaaaagataaaagcaaagagcattggcagtctgttattcgtcagcttatt
catttgggttttgtgcaacaggttattagtgaattaaatccaacgttgcaacttactgaa
agtgcgaaagtgattttgaaaggcgaagaaccgttagaattggcaatgcctcgtatttct
tcaatcagtaaaattgcccataatccacaacgtcaaggtgttgcaaattacgataaggat
ttatttgcacgcttgcgtttcctacgcaaacaaattgccgataaagaaaatattccgccg
tacattgtctttaatgatgcgacgttgcaagaaatggcacaatatatgccgacaagcaat
attgaaatgttgcaaattaatggcgtgggctctatcaaattagagcggtttgggcagccg
tttatggcattgattcaagaacataaggcaattttggcgaatgcgcaaaataatgactaa
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