Haemophilus influenzae 86-028NP (nontypeable): NTHI0897
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Entry
NTHI0897 CDS
T00248
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hit
Haemophilus influenzae 86-028NP (nontypeable)
Pathway
hit03030
DNA replication
hit03430
Mismatch repair
hit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NTHI0897 (dnaE)
03430 Mismatch repair
NTHI0897 (dnaE)
03440 Homologous recombination
NTHI0897 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hit03032
]
NTHI0897 (dnaE)
03400 DNA repair and recombination proteins [BR:
hit03400
]
NTHI0897 (dnaE)
Enzymes [BR:
hit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NTHI0897 (dnaE)
DNA replication proteins [BR:
hit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NTHI0897 (dnaE)
DNA repair and recombination proteins [BR:
hit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NTHI0897 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AAX87791
UniProt:
Q4QMF6
LinkDB
All DBs
Position
complement(864076..867555)
Genome browser
AA seq
1159 aa
AA seq
DB search
MSFQPRFVHLRTHTDFSMIDSIVKVKPLVKACAANEMVAMGLTDFTNFCGVVSFYSEMLS
SGMKPIIGADVKVKSPLCGDEYFDLTLLAKNNEGYRNITLLLSKAYQRGYNDLPYIDQDW
LIEHRDGVIILSGGTQGDVGKKLLKENVAEIESAVAFYQEFFADHFYLALSRTGRPNEER
YIQAALKLAERCDLPLVATNDVMFLNAEDFEAHEIRVAIHDGYTLDDPKRPKCYTSQQYF
RSEEDMCKLFADIPSALENTLLIAQRCSVTLRLGQYFLPQFPTGDLSTEDFLVQKSKEGL
EERLVFLFPDEKVRLEKRPKYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEHVAE
TYGRGAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFETEPQ
LQTAYDSDEEVRALINMARKLEGVTRNAGKHAGGVVISPTLITDFAPLYCDNEGLHPVTH
FDKNDVEYAGLVKFDFLGLRTLTIIKWALDIINVRMVREGKPRVDIAAIPLDDPESFELL
KRSETTAVFQLESRGMKDLIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREE
VSYPDAEYQHASLKPILEPTYGIILYQEQVMQIAQVLAGYTLGGADLLRRAMGKKKPEEM
AKQRLVFKEGAEKNGVDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPA
EFMAAVMTSEMDNTDKIVGLYDECLRMGLKVTPPDINIGKHHFSVNEQGEIVYGIGAIKG
VGEGPIEALVAARNEGGIFKDLFDLCARVDLKKINRRTFESLIMSGAFDKLGPHRAALSK
NLEDALRASDQHAKDEAMGQTDMFGVLTETHEDVENAYANTPPYTEKQILDGERETLGLY
LSSHPVSRYLKELSHYTSTRLKDLAPNRRGQISTVAGLVVASRIAMTKKGNRLGIATLDD
RSGRLDLTLFGESLEQFGEKLQKDTVIVASGQVSFDDFSGGLKMTVRELMTLDEARSRYV
KSLAISLSEHQITPSFIKQFKALLEPVSGGTLPINVYYQSPKGRALLRLGVQWSIIPTDE
ILTELVNLLGESAVELEFE
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtcattccaacctcgcttcgtccatcttcgcacacacacagatttttcgatgattgac
agtatcgtcaaagtaaaacctcttgtgaaagcttgtgctgccaatgaaatggttgctatg
ggattaacggattttactaatttttgtggtgtggttagtttttatagcgaaatgctttct
tcgggtatgaagcccattatcggggcagatgtaaaagtaaaaagcccattatgtggcgat
gaatactttgatcttactttgctggctaaaaataatgaaggctatagaaatattacttta
ttgttatcaaaggcttatcaacgcggttataacgatttaccttatattgatcaagattgg
ttaattgaacatcgcgacggcgtgattattttatcagggggaacgcaaggcgatgtgggt
aaaaaattgttgaaagaaaacgtagccgaaattgaaagtgcggtcgctttttaccaagaa
ttttttgccgatcatttttatttagcattaagtcgtacaggtcgcccaaatgaagaacgt
tacattcaagcagcgttgaaattagcagaacgttgtgatttaccattggtcgcaactaat
gatgtgatgtttttgaatgcagaggattttgaagcccacgaaattcgcgtagcgattcac
gatggctatactttagacgatcctaaacgtccgaaatgttatacctcacagcaatatttt
cgtagtgaagaagatatgtgtaagctgtttgcagacattccttccgctctcgaaaatacc
ttattaattgcgcaacgttgtagtgtgactttgcgccttggtcaatatttcttacctcaa
tttccaactggcgatttaagtacagaagatttcttagtgcaaaaatccaaagagggcttg
gaagaacgtttagtttttttattccctgatgaaaaagtgcggttagaaaaacgaccaaaa
tatgatgaacgcttgcaagttgagctagatgtaattaaccaaatggggttcccaggttat
ttcttgatcgtaatggaatttattcaatggtctaaggataacgatattccagtagggcca
ggtcgtggttctggtgcgggttcattagtggcttatgcattaaaaatcactgatttagat
ccgttagagtttgatttgctatttgaacgtttcttaaatccagaacgtgtgtctatgccc
gatttcgacgtggatttctgtatggatggtcgcgatcgcgtgattgagcacgttgcagaa
acctatggtcgtggcgcggtatcacaaattattacctttggcacaatggcggcgaaagcg
gttattcgagatgtagggcgagtgctggggcatccttatggtttcgttgatcgtatttct
aaattgattccgccagatccaggtatgacgcttgccaaagcgtttgagaccgagccgcaa
ttacagactgcctacgatagcgatgaagaagtgcgagcattgattaacatggcgcgcaag
ctggaaggtgtgacacgtaatgcaggtaaacatgcaggtggcgtggtcatttcgccaacc
ttaattactgatttcgcaccactctattgtgataatgaaggcttacatccggttactcac
tttgataaaaatgatgtggaatatgcagggcttgtgaaatttgacttcctaggcttgcgt
actctcactatcattaaatgggcattggatataattaatgttcgtatggtgcgtgaaggc
aagcctcgagtagatattgccgccattccacttgatgatcctgaatcttttgaattactt
aaacgttccgaaaccaccgctgtgttccagttggaatcacgaggtatgaaagatttgatc
aaacgcctgcaacctgactgttttgaagatattatcgcattggtagcattgttccgtccg
ggtccgttacaatcgggtatggtagataactttatcgaccgtaaacacgggagagaagaa
gtatcttaccctgacgcagaatatcaacatgcaagtttgaaacctattcttgagccgact
tacggcattattttgtatcaagaacaagtgatgcaaattgcgcaggtgttggctggctat
acgctgggtggggctgacttattgcgtcgagcaatgggtaaaaagaaaccagaagaaatg
gcaaaacagcgtttagtgtttaaagagggggctgagaaaaacggtgttgatggcgagcta
tctatgaagattttcgacttggtggaaaaatttgctggctatggttttaataaatctcac
tccgctgcttatgccttggtgtcttaccaaactctttggcttaaaactcatttccctgca
gaatttatggctgcagtgatgacatctgaaatggataatacggataaaatcgtaggtttg
tacgacgaatgtttgcgtatgggcttaaaagtgacgccaccagatattaatatcggaaaa
caccattttagtgtcaatgaacaaggcgaaattgtgtatgggattggcgcgattaaaggc
gtgggggaaggcccgattgaagcacttgtggcggcaagaaatgaaggggggattttcaaa
gatttattcgatttatgcgctcgtgtagatttgaaaaaaattaaccgccgtacttttgaa
agcctaattatgtcgggtgcctttgataaattaggcccacatcgcgccgcactttctaag
aatttggaagatgcacttagagcttccgatcagcatgcgaaagatgaagcaatgggacaa
acggatatgttcggtgtgctgactgaaacccatgaagacgtggaaaatgcctatgctaat
acaccaccttacactgaaaaacaaatccttgatggcgaacgagaaaccttggggctttat
ttaagtagccatcctgttagccgttatttgaaagaactttctcattacacatcaacgcgg
ttgaaagatctcgcaccaaatcgccgtggacaaattagcactgtggcggggctagtcgtg
gcatcgagaattgcgatgacgaaaaaaggcaatcgtctaggtattgcaacattggacgat
cgttcaggtcgcttagatttaacattatttggtgaaagcctagaacaatttggtgagaaa
ttacaaaaagatacagtgattgttgcttcagggcaggtgagctttgatgatttctctggt
ggcttgaaaatgacggtgcgcgagttaatgaccttagatgaggcacgttctcgttatgtc
aaatccttggctattagtctttctgagcatcaaattacaccaagtttcattaaacaattt
aaagcattacttgagccagtgagtggtggaacattgcctattaacgtgtattatcaaagt
ccgaaaggtcgtgcgttgttacgtttaggcgtgcaatggtcgatcattccaacagatgaa
attctgacggaattggtgaatttactcggcgaaagtgcggtggaattagagtttgaataa
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