Haemophilus influenzae 86-028NP (nontypeable): NTHI1113
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Entry
NTHI1113 CDS
T00248
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
hit
Haemophilus influenzae 86-028NP (nontypeable)
Pathway
hit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NTHI1113 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hit03400
]
NTHI1113 (recC)
Enzymes [BR:
hit01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NTHI1113 (recC)
DNA repair and recombination proteins [BR:
hit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NTHI1113 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AAX87981
UniProt:
Q4QLW6
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All DBs
Position
1059157..1062522
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AA seq
1121 aa
AA seq
DB search
MFIIYYSNQLEKQKEILSSLFKSLPPEDPFQQDIILVQSPNMAQWLQIELAKETGISANL
KFPMPASFIWQLYAQNLPATALENPFDKDSMMWRLIRLIPTFLEKENFLPLRNYLASSPH
SEQYKLYQLSSKIADLFDQYLVYRAEWIFAWEKGEDEQITAQIRKQQPNLNDTLFEQIQG
NIKWQGELWRALVVDVKSDVDDATHRAALHNQFLALLADKKAPKKLPSRIFIFGIPALPT
AYLNILQAISSEVDIHLFFNNPCQEYWGDISDLRLDYLRSRQRYQFNKQNENQPLFSEEQ
LSQLENAQFDVTYQNENLQVGNPLLAAWGKMGRDFLYTLVRDEEHIPTYPVNAYQEIKSN
SLLGQLQSQILHLENKPLNIAKNDRTLTLHSCHSAMREVEVLHDYLLDLFNQDPNLTPKD
VVVMVADINQYTPYIQAVFGQKNRNAPQIPFSLSDNKLSESDVLVSSYLTLLRLKESNFS
AEDVLALLDIPATRERFNISLADLPLVREWVADSGIRFGLQKNQDGINFNSWQAGLERMI
LGYAMREEQGIWQDSLGLNSSYGLKGELAGNLSYFFTALSLLHETLQQAHSIEKWQEILT
ALLSDFFVQNEDTSDTIFYIQEKINELAEHLKMLHFTEKLQADVIADVITMKLEDAPNSL
KFLAGKVNFCTLLPMRSVPFKVVCLLGMNDADYPRTQTPNSFDLMQYHYQKGDRVRRDDD
RYLFLEALLAARNYCYISYIGRSITDNQPKEPSVLVSQLVDYINQGQKENVLTVIEHPMT
AFSPDNFKYNEKFTRSFATKWLPMAQFDASASNSEFAVTMTENPEKIEEVELDSLVSFVE
NPVKFFFEKQLGVYFRDKDERIADSENFTLSGLDNYSLNNDLIYLDEQNFADYFRQAEVK
GVLPRAEFGKVYAENIRDNVLEFKEKIADLGEPKQASIDFNIAVDWQNENQKIRLFGYME
ALFGDNSQVIHWHFAKYKDRYCIRPWIYYLIQCVTQENAVPAKLITQDKVLELPPIEREV
ALAQLQIYVKDYLQSQIEIQLVPTVRNISDFIVSDENSVSEKLQELTESNGFGSKADPYW
SRVLAQTSRFKQPENIAKLLKQTKAWFGLLFAQKKTRKAQS
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
gtgttcattatttattattccaatcagcttgaaaaacaaaaagaaattctttcttcttta
ttcaaatctttaccacctgaagatccttttcaacaagatattattttggtgcaaagccct
aatatggcacaatggctacaaattgaactcgccaaagaaacaggcatttcagcgaaccta
aaatttcctatgccagcaagttttatttggcagctttatgctcaaaatttacccgcaacg
gcattggaaaacccttttgataaagattcaatgatgtggcgtttaatacgcttaatcccg
acttttctcgagaaagaaaattttttgcctttacgaaattatttagcatcttcgccacat
tctgaacaatacaaactttatcaacttagcagtaaaatagccgacttatttgaccaatat
ttagtttaccgagctgaatggatttttgcttgggaaaaaggcgaagatgaacaaatcact
gcgcaaatacgaaagcaacaacctaacctaaacgatacgttgtttgagcaaattcaaggc
aatataaaatggcaaggggagctatggcgtgcgttggtcgtcgatgttaaatcagatgtt
gatgatgctacacatcgagcggctttgcataatcagttcttagccttgcttgcggataaa
aaagcaccgaaaaaattaccttcacgcatatttatttttggtattccagcgcttccaact
gcttatctcaatattttgcaagcgatatcctctgaagtggatattcatttattttttaat
aatccttgccaagaatattggggggatattagtgatctacgccttgattatttgcgttct
cgtcagcgttatcaattcaataaacaaaatgaaaatcaaccgctcttttctgaggaacaa
ctttctcaactagaaaacgctcagtttgacgtcacttatcaaaatgaaaaccttcaagta
ggcaatccattgctggcggcttgggggaaaatgggacgagattttctctataccttagtg
cgagatgaagaacatattccaacttatcccgtcaatgcttatcaagaaattaaatcgaac
agtttacttggacaattgcaatctcaaattctgcatttagaaaataaaccgttaaatatc
gcaaaaaatgaccgcactttaactctacattcttgccacagtgctatgcgggaagtggaa
gtcttgcacgattatttactcgatttattcaatcaagatcctaaccttacgccaaaagat
gtagttgttatggtggcagatataaatcaatacacgccttatattcaggccgttttcggg
caaaaaaatagaaatgctccacaaattccattttcactttcagataataaactttcagaa
agcgatgtgttggtctcaagttacttaactttattacgcttaaaagaaagcaattttagt
gcggaagatgtgttagcgttgttggatattcctgcgacgcgagaacgatttaatatttct
cttgctgatttaccattagtgcgagaatgggtggcggattcagggattcgtttcggtttg
caaaaaaatcaagatggcatcaattttaattcttggcaagctggattagaaagaatgatt
ttaggctatgcgatgcgtgaagagcagggtatttggcaagatagtttggggttaaacagc
agctatggcttaaaaggtgaacttgctggaaatttatcgtactttttcaccgcactttcc
ttgctgcatgaaaccctgcaacaagcacattccatcgaaaaatggcaagaaattttaacc
gcacttttatcagatttcttcgtacaaaatgaagacactagcgacacgattttctatatt
caagagaaaattaatgaattagctgagcatctaaaaatgctccattttactgaaaaatta
caagcagatgtgattgccgatgtcatcacaatgaaattggaagatgcgccaaatagcctc
aaattccttgcagggaaagtaaacttctgcaccttattaccaatgcgttcagtgccattc
aaagtggtttgtttacttggaatgaatgatgccgattacccaagaacacaaacaccaaac
agttttgacttaatgcaatatcattatcaaaaaggcgaccgtgttcgccgtgatgatgat
cgttatttgttcttagaggccttattagccgcacgtaattattgctatatcagctatatt
gggcgttccattaccgataatcaaccgaaagaaccctccgtattggtaagccaactcgtg
gattatattaatcaagggcaaaaggaaaatgtccttactgtcattgaacatccaatgacc
gcatttagcccagataatttcaaatataacgagaaatttacccgctcttttgcgacaaaa
tggttgccaatggctcaatttgacgcaagtgcaagtaattcggaatttgccgtcactatg
acagaaaacccagaaaaaatcgaagaagttgaactggattctttagtcagctttgtggaa
aatccagtgaaatttttctttgaaaaacaacttggtgtttatttccgcgataaagatgaa
cgcattgctgacagtgaaaacttcactttaagtgggttagataattattctctcaataat
gacttaatttaccttgatgaacaaaattttgctgattattttagacaagcagaagtaaaa
ggcgtgttaccgcgcgcagagtttggaaaggtttatgctgaaaatattcgcgataatgtt
ttagaatttaaagagaaaatagccgatcttggcgagcctaaacaggcttctatagatttt
aatattgccgtagattggcaaaacgaaaatcaaaaaatccgtttatttggttatatggag
gctttatttggcgataattcacaagtcattcactggcattttgcgaaatacaaagatcgt
tattgtattcgtccttggatttattatttaattcaatgtgttacacaagaaaatgcggta
ccagcaaaattaattacgcaagataaggttctcgaattaccgcctattgagcgtgaagtt
gcgcttgctcaattacaaatttacgtaaaagattatttacaaagccaaatagaaatacaa
ttggtgccaacagtaagaaatataagtgattttattgtaagtgatgaaaattccgtttct
gaaaaacttcaggaattaactgaaagtaatggtttcgggtcaaaagccgatccatattgg
tcacgagtattagcgcagacctcaagatttaaacaacctgaaaatattgcgaaattatta
aaacaaacaaaagcttggtttggcttattattcgcacaaaagaagacaagaaaggcacaa
agctaa
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