Haemophilus influenzae 10810 (serotype b): HIB_08730
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Entry
HIB_08730 CDS
T01720
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hiu
Haemophilus influenzae 10810 (serotype b)
Pathway
hiu03030
DNA replication
hiu03430
Mismatch repair
hiu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hiu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HIB_08730
03430 Mismatch repair
HIB_08730
03440 Homologous recombination
HIB_08730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hiu03032
]
HIB_08730
03400 DNA repair and recombination proteins [BR:
hiu03400
]
HIB_08730
Enzymes [BR:
hiu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HIB_08730
DNA replication proteins [BR:
hiu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HIB_08730
DNA repair and recombination proteins [BR:
hiu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HIB_08730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
CBW29060
LinkDB
All DBs
Position
complement(902092..905571)
Genome browser
AA seq
1159 aa
AA seq
DB search
MSSQPRFVHLRTHTDFSMIDSIVKVKPLVKACAANEMVAMGLTDFTNFCGVVSFYSEMLS
SGMKPIIGADVKVKSPLCGDEYFDLTLLAKNNEGYRNITLLLSKAYQRGYNDLPYIDQDW
LIEHRDGVIILSGGTQGDVGKKLLKENVAEIESAVAFYQEFFADHFYLALSRTGRPNEER
YIQAALKLAERCDLPLVATNDVMFLNAEDFEAHEIRVAIHDGYTLDDPKRPKCYTSQQYF
RSEEDMCKLFADIPSALENTLLIAQRCSVTLRLGQYFLPQFPTGDLSTEDFLVQKSKEGL
EERLVFLFPDEKVRLEKRPKYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEHVAE
TYGRGAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFEAEPQ
LQTAYDSDEEVRALINMARKLEGVTRNAGKHAGGVVISPTLITDFAPLYCDNEGLHPVTH
FDKNDVEYAGLVKFDFLGLRTLTIIKWALDMINVRMVREGKPRVDIAAIPLDDPESFELL
KRSETTAVFQLESRGMKDLIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREE
VSYPDAEYQHASLKPILEPTYGIILYQEQVMQIAQVLAGYTLGGADLLRRAMGKKKPEEM
AKQRLVFKEGAEKNGVDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPA
EFMAAVMTSEIDNTDKIVGLYDECLRMGLKVMPPDINIGKHHFSVNEQGEIVYGIGAIKG
VGEGPIEALVAARNEGGIFKDLFDLCARVDLKKINRRTFESLIMSGAFDKLGPHRAALSK
NLEDALRASDQHAKDEAIGQTDMFGVLTETHEDVENAYANTPPYTEKQILDGERETLGLY
LSSHPVSRYLKELSHYTSTRLKDLAPNRRGQISTVAGLLVASRIAITKKGNRLGIATLDD
RSGRLDLTLFGESLEQFGEKLQKDTVVVASGQVSFDDFSGGLKMTVRELMTLDEARSRYV
KSLAISLSEHQITPSFIKQFKALLEPVSGGTLPINVYYQSPKGRALLRLGVQWSIIPTDE
ILTELVNLLGESAVELEFE
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcccaacctcgcttcgtccatcttcgcacacacacagatttttcgatgattgac
agtatcgtcaaagtgaaacctcttgtgaaagcttgtgctgccaatgaaatggttgctatg
ggattaacggattttactaatttttgtggtgtggttagtttttatagcgaaatgctttct
tcgggtatgaagcccattatcggggcagatgtaaaagtaaaaagcccattatgtggcgat
gaatactttgatcttactttgctagctaaaaataatgaaggctatagaaatattacttta
ttgttatcaaaggcttatcaacgcggttataacgatttaccttatattgatcaagattgg
ttaattgaacatcgcgacggtgtgattattttatcagggggaacgcaaggcgatgtaggt
aaaaaattgttgaaagaaaacgtagccgaaattgaaagtgcggtcgctttttaccaagaa
ttttttgccgatcatttttatttagcattaagtcgtacaggtcgcccaaatgaagaacgt
tacattcaagcagcgttgaaattagcagaacgttgtgatttaccattggtcgcaactaat
gatgtgatgtttttgaatgcagaggattttgaagcccacgaaattcgcgtagcgattcac
gatggctatactttagacgatcctaaacgtccgaaatgttatacctcacagcaatatttt
cgtagtgaagaagatatgtgtaagctgtttgcagacattccttccgctctcgaaaatacc
ttattaattgcgcaacgttgtagtgtaactttgcgccttggtcaatatttcttacctcaa
tttccaactggcgatttaagtacagaagatttcttagtgcaaaaatccaaagagggcttg
gaagaacgtttagtttttttattccctgatgaaaaagtgcggttagaaaaacgaccaaaa
tatgatgaacgcttgcaagttgagctagatgtaattaaccaaatggggttcccaggttat
ttcttgatcgtaatggaatttattcaatggtctaaggataacgatattccagtagggcca
ggtcgtggttctggtgcgggttcattagtggcttatgcattaaaaatcactgatttagat
ccgttagagtttgatttactatttgaacgtttcttaaatccagaacgtgtgtctatgccc
gatttcgacgtggatttctgtatggatggtcgcgatcgcgtgattgaacacgttgctgaa
acctatggtcgtggcgcggtatcacaaattattacctttggtacgatggcggcgaaagcg
gttattcgagatgtagggcgagtgctggggcatccttatggtttcgttgatcgtatttcg
aaattgattcctcccgatccaggtatgacgcttgccaaagcgtttgaggccgagccgcaa
ttacagactgcctacgatagcgatgaagaagtgcgagcattgattaacatggcgcgcaag
ctggaaggtgtgacacgtaatgcaggtaaacatgcaggtggcgtggtcatttcgccaacc
ttaattactgattttgcaccgctctattgtgataatgaaggcttacatccggttactcac
tttgataaaaatgatgtggaatatgcagggcttgtgaaatttgacttcctaggcttgcgt
actctcactatcattaaatgggcattggatatgattaatgttcgtatggtgcgtgaaggc
aagcctcgagtagatattgccgccattccacttgatgatcctgaatcttttgaattactt
aaacgttccgaaaccaccgctgtgttccagttggaatcacgaggtatgaaagatttgatc
aaacgcctgcaacctgactgttttgaagatattatcgcattggtagcattgttccgtccg
gggccgttacaatcgggtatggtagataactttatcgaccgtaaacacgggagagaagaa
gtatcttaccctgacgcagaatatcaacatgcaagtttgaaacctattcttgagccgact
tacggcattattttgtatcaagaacaagtgatgcaaattgcgcaggtgttggctggctat
acgctgggtggggctgacttattgcgtcgagcaatgggtaaaaagaaaccagaagaaatg
gcaaaacagcgtttagtgtttaaagagggggctgagaaaaacggtgttgatggcgagcta
tctatgaagattttcgacttggtggaaaaatttgctggctatggttttaataaatctcac
tctgctgcttatgccttggtgtcttaccaaactctttggctcaaaacccatttccctgca
gaatttatggctgcagtgatgacatctgaaatagataatacggataaaatcgtaggtttg
tacgacgaatgtttgcgtatgggcttaaaagtgatgccaccagatattaatatcggaaaa
caccattttagtgttaatgaacaaggcgaaattgtgtatgggattggcgcgattaaaggc
gtgggggaaggcccgattgaagcacttgtggcggcaagaaatgaaggggggattttcaaa
gatttattcgatttatgcgctcgtgtagatttgaaaaaaattaaccgccgtacttttgaa
agcctaattatgtcgggtgcctttgataaattaggcccacatcgtgccgcactttctaag
aatttggaagatgcacttagagcttccgatcagcatgcgaaagatgaagcaataggacaa
acggatatgttcggtgtgctgactgaaacccatgaagacgtggaaaatgcctatgctaat
acaccaccttacactgaaaaacaaattcttgatggcgaacgagaaaccttggggctttat
ttaagtagccatcctgttagccgttatttgaaagaactttctcattacacatcaacgcgg
ttgaaagatctcgcaccaaatcgccgtggacaaattagcactgtggcgggattattggtc
gcatcacgaattgcaatcacaaaaaaaggcaatcgcttaggcattgccacattagatgat
cgttctggtcgcttagatttaacattatttggtgaaagtctagaacaatttggtgagaaa
ttacaaaaagataccgttgttgttgcttctgggcaagtgagctttgatgatttctctggt
ggcttaaaaatgacggtgcgcgagttaatgaccttagatgaggcacgttctcgttatgtc
aaatccttggctattagtctttctgagcatcaaattacaccaagtttcattaaacaattt
aaagcattacttgagccagtgagtggtggaacattgcctattaacgtgtattatcaaagt
ccgaaaggtcgtgcgttgttacgtttaggcgtgcaatggtcgatcattccaacagatgaa
attctgacggaattggtgaatttactcggcgaaagtgcggtggaattagagtttgaataa
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