Haemophilus influenzae 10810 (serotype b): HIB_14860
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Entry
HIB_14860 CDS
T01720
Name
(GenBank) exonuclease V (RecBCD complex), beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
hiu
Haemophilus influenzae 10810 (serotype b)
Pathway
hiu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hiu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HIB_14860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hiu03400
]
HIB_14860
Enzymes [BR:
hiu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HIB_14860
DNA repair and recombination proteins [BR:
hiu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HIB_14860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
ResIII
AAA_12
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
CBW29673
LinkDB
All DBs
Position
1539733..1543368
Genome browser
AA seq
1211 aa
AA seq
DB search
MAETIPLNPITLPLNQISLIEASAGTGKTYTIGSLYLRLLLKAGENNFSRPLNVEEILVV
TFTEMATEELKKKIRERITDAINKLTAFAKTQDKSAFKNDEFLTALCHDLDIFEAIHRLK
LAEQNMDLAAIYTIHGFCRRMLMQYAFHSGIHFNLELIKDQSDLLVRFANEFWREHFYPL
DFESANFIATELVSPANVLSLLKADLGKDLQVEIENKQALSVPIQIFLPKYLGGYQKALN
ELKAFWLESADEISAIITNELVKDYPKDQLKSLNRKKYQVKRLGDWINKINQWSNNPRDY
QINTTLKDYFLQSSIEKNCEESTDKNKDKKTATPFYSPIFAELEKRVNALMTPDLLSKLT
LYHYRQGLQQKLLDYKFNHQEKSFDDLLRLLCEALQGAQGDELAEMIRFQYPFAMIDEFQ
DTDSQQYAIFSKIYRDNPEKNTGFIMIGDPKQAIYRFRGADIFTYLKASDEAQSRFELTK
NYRSEKNLVDGVNALFDFPQSPFIYQNINFTAVDSRDDHLRFYLNGKAEPAYRFYLTESD
KVNKTEMAKICAISIQHWLKSAVENQAVFQNEDTCKTLQAANIAVLVRDKNEAALVKNEL
QKLGIASVYLSDQNSVFDSNVAKELAWVLKACLNVAERPILNAIATALFGLNAADIHQIQ
QNEADWQRWADSFAQYQQTWQRQGILAMLYQILLEQGISERLLSQATGERDLTDFLHLAE
ILQQAATLHESEAALLSWFEKQIQGEGRQEAQIRLESERQLVKIVTIHKSKGLEYDLVWL
PFLAVPSKDPSKKDINIYYSKERDETLWDMENRNLNALCEETFAEELRLLYVALTRAKYQ
MAFALPAQFDKKWNALHYVLSQGEIGKEINLSESKDTETLLQTFKEKMRDNVEICTKPNL
EAFPTLSINTKNDDLKAAEFTGNIEQDWRITSFTSIEQAHRRQNYFTESAGKKHAVFDDA
KDYDSQNAIEMSTALLNENESNILDLPRGKQVGTALHRHFENCYFSDLANTEEIEKLRQS
LQLDETFTEPLQNWLQQISHTPLSHEIGIALADLANKDCIKEMPFYLAIREHFDVEAFNH
TLKAHHHLPSEPLQFEQIQGMVRGSIDLVFRHNGKYCLVDYKSNFLGSTLADYNQEALKK
EMLHSHYDWQYLIYTLALHRYLQSVVPHYDYVRDFGGVFYLFLRGMNGEPQSGVFYDHPS
VELITELDGVF
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaacaatcccactgaatcccatcacactgcctttaaatcaaattagcttaatc
gaagcatctgctggtacgggaaaaacatatactattggttctttatatctccgactttta
ttaaaggctggagaaaataacttttctcgtccattaaatgtggaagaaattctggtggta
acatttacggaaatggcaacagaagaactcaagaaaaaaattcgtgagcgtataacagat
gcgattaataaactcactgcctttgctaaaacccaagataaatccgcatttaaaaatgat
gaatttcttaccgcactttgtcatgatttagatatttttgaggcaattcatcgcttaaag
ttagctgaacaaaatatggatttggcggcgatttataccattcacggtttttgtcgccgt
atgttgatgcaatatgctttccattctggcattcatttcaatttagaattaataaaagat
caatctgatttgttagttcgttttgctaatgaattttggcgagaacatttttatccgtta
gattttgaatctgcgaattttatcgcgacagaattagtatcaccagcaaatgtgttgtct
ttgttgaaagcggatttaggtaaagatttgcaggtggagattgaaaataaacaggcgtta
tctgtaccaatacaaatctttttaccgaaatatcttggtggttatcaaaaggcgttgaat
gaattaaaggcattttggttagaaagtgcggatgaaatttcagcgattattacaaatgag
ctggttaaagattatccaaaagatcagttgaaatcgttaaatcgtaaaaagtaccaagta
aagcgtttaggggattggattaataaaatcaatcaatggtcaaataatcctagagattat
caaattaataccacattgaaagactatttcctacaatcatctattgagaaaaattgcgaa
gaatcaacggataaaaataaagataaaaaaaccgcaacgcctttttattccccgattttt
gcagagcttgaaaagcgcgttaatgccttaatgacaccagatttactcagcaaactcact
ctttatcattatcgccaaggtctacaacaaaaacttttagactataaatttaatcatcaa
gaaaaatcctttgatgatttattgcgtttgctttgcgaagccttgcaaggtgcgcaagga
gatgaattagcggaaatgattcgtttccaatatccttttgcgatgattgatgaatttcag
gatacggattcacaacaatacgctattttttcaaaaatttatcgtgataatcccgaaaaa
aatactggttttattatgattggtgatccgaagcaggcgatttatcgtttccgtggcgca
gatatttttacttatctaaaagcatcggatgaagcccaatctcgctttgaactcactaaa
aattatcgttcagagaagaatctggttgatggcgtaaatgcgttgtttgattttcctcaa
tcgccatttatttatcaaaatattaactttactgctgttgattctcgtgatgatcatctg
cgattttatttaaatggcaaagccgaaccagcttatcgtttttatctaactgaaagtgac
aaagtgaataaaactgaaatggcaaaaatatgtgctatttctattcaacattggctaaaa
agtgcggtagaaaatcaggcagtttttcaaaatgaagatacttgtaaaacattgcaagcg
gcgaatattgccgtattggtgcgtgataaaaatgaagcggctttagtaaaaaatgaattg
caaaaattgggaatcgcgtcggtttatctttctgatcaaaatagcgtatttgatagcaat
gttgcgaaagaattagcttgggtgcttaaagcctgtttgaatgtggcagaacgtccaatt
ttgaacgcgattgcgaccgcactttttggcttaaatgcagcggatattcatcaaattcag
caaaatgaagcagattggcaacgttgggcagatagctttgctcaataccaacaaacttgg
caacgccaaggaatattggcaatgttatatcaaattttattggagcaaggcatttcagag
cgattattaagccaagccacgggcgagcgagatttaacggatttcctacatttggcagaa
attttacaacaagctgccacgctacacgaaagtgaagcggcattgctcagttggtttgaa
aaacaaattcaaggcgaaggtcgtcaagaggctcaaattcgtttagaaagtgaacgccag
ttggtaaaaatagtgacaatccataaatctaaaggcttagaatatgatttagtttggcta
ccatttttagctgtgccgagtaaagatccaagtaaaaaagacatcaatatttattattct
aaagaacgagatgaaaccttatgggatatggaaaatcgcaatttgaacgctctttgtgaa
gaaacgtttgcggaagagttacgtttactttatgtggctttaacgcgtgccaaatatcaa
atggcattcgctttgcctgcgcaatttgataaaaaatggaatgccttgcattatgtacta
agccaaggtgaaataggcaaagaaataaatttgtcagagtctaaagatactgagacgttg
ttacaaacctttaaagaaaaaatgcgagataatgtggaaatctgtactaagccaaatcta
gaggcttttccgaccttatcaattaatacaaaaaatgatgatcttaaagccgcagaattt
acgggcaatattgagcaagattggcgaataaccagttttacttcaattgaacaagcgcat
cgccgacaaaattatttcactgaaagtgcgggtaaaaaacacgctgtttttgatgacgca
aaagattacgatagtcaaaatgctattgaaatgtccaccgcacttttaaacgaaaatgaa
tcaaatattttagatttaccacgaggtaaacaagtcgggactgcattgcatcgccatttt
gaaaattgctatttttctgatttagcaaatacagaagaaattgagaaattaagacaatcc
ttacagttagatgaaacctttacagagccgctacaaaattggctacaacagatttcacat
acgccactttctcatgaaataggaatagcattagctgatttggcaaataaagattgcatt
aaagaaatgccattttatttggctattcgggaacattttgatgttgaagcgtttaatcac
acgttgaaagcccatcatcatttaccaagtgagccacttcaatttgagcaaattcaaggc
atggtgagaggttcgattgacttagttttccgccataatgggaaatattgtcttgttgat
tataaatctaatttcttaggttcaactcttgctgattacaatcaagaggcattgaaaaaa
gaaatgttacacagtcactatgattggcaatatttaatttatacgctggcattacatcgt
tatttgcaaagtgttgtgcctcattacgattatgtgcgagatttcggtggggtattttat
cttttcttacgtggaatgaatggtgagccacaatctggcgtattttacgatcatccaagc
gttgaattaatcacagaattagacggggtgttttaa
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