Haemophilus influenzae 477: NTHI477_00550
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Entry
NTHI477_00550 CDS
T03720
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hiw
Haemophilus influenzae 477
Pathway
hiw03420
Nucleotide excision repair
hiw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hiw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NTHI477_00550 (uvrD)
03430 Mismatch repair
NTHI477_00550 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hiw03400
]
NTHI477_00550 (uvrD)
Enzymes [BR:
hiw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NTHI477_00550 (uvrD)
DNA repair and recombination proteins [BR:
hiw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NTHI477_00550 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NTHI477_00550 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PhoH
Motif
Other DBs
NCBI-ProteinID:
AJO87587
LinkDB
All DBs
Position
564442..566625
Genome browser
AA seq
727 aa
AA seq
DB search
MMDISELLDGLNDKQREAVAAPLGNHLVLAGAGSGKTRVLTHRIAWLIAVENISEGSIMA
VTFTNKAAAEMRHRIQATLAKHAQHQLFGMWIGTFHSIAHRLLRAHHLDVGLPQDFQILD
SEDQLRLIKRLLKLHNFDEKAFPPKQACWYINNKKDEGLRPNDIEDFNDRQEREWIKIYQ
IYQDTCDRAGLVDFAELLIRSYELFEKKPLILQRYQQRFQHILVDEFQDTNKIQYKWIKI
LAGKTGKVMIVGDDDQSIYGWRGAQIENIQKFLKDFNAETIRLEQNYRSTANILNSANEL
IANNSDRLGKNLWTEGEKGDPVGIYAAFNELDEAKFVASQIQDWVEHGGKLDDCAVLYRS
NSQSRVIEEALIRCQIPYRIYGGMRFFERQEIKDALAYLRLINNRQDDAAFERVINTPTR
GIGDRTLDILRNLTRERQITLWQAVQVATQENMLAGRASTALLRFQELINSLQLDIAEMP
LFAQTDFVIKHSGLYEMYQQEKGEKGEVRIENLEELVSATREFIKPDDAEEMTELTAFLT
HASLEAGEEQASPHQFCVEMMTLHSAKGLEFPRVFMVGVEEGLFPSFRSFEEPGRLEEER
RLAYVGITRAKKKLTISYAESRRLYAKEERHLPSRFIAELPRECIQEIRLRGTVTRAMNL
TKVGSLSNTSAVENEWKMGQKVKHEKFGFGTVINVEGSDNNTRLQIAFQAQGIKWLIAHL
AKLEKVR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgatggatatttctgaattacttgacgggcttaacgataaacaacgcgaagccgtagct
gctcctcttggtaatcacttagtgctagctggtgcaggctctggtaaaacgcgcgtattg
acgcatcgtatcgcttggttaattgcggtagaaaatatttctgaaggcagtattatggcg
gtaacgtttaccaataaagcggcagcagaaatgcgtcatcgtattcaagctacacttgcc
aaacacgcacaacatcaattatttggtatgtggattggaacctttcatagcattgcccat
cgtttattgcgagcgcatcatttagatgtgggattgccacaggatttccaaattttggat
tcagaagatcaacttcgtttaattaaacggttattaaaattacataattttgatgagaaa
gcttttccgccgaaacaggcttgttggtacatcaataacaaaaaagatgaaggcttgcga
ccaaacgacattgaagattttaatgatcgtcaagaacgtgaatggattaaaatttatcag
atttatcaagacacttgcgatcgcgcaggattagtcgattttgctgaattattaattcga
tcctatgaattatttgagaaaaaaccattgattttgcaacgttatcaacaacgttttcag
catattttggtggatgaatttcaagacaccaataaaattcaatataaatggatcaaaatt
ctcgcgggaaaaacaggcaaagtaatgattgtgggcgatgatgatcaatctatttatggc
tggcgtggcgcacaaattgaaaatattcaaaaattcttgaaagatttcaacgccgaaacc
attcgtcttgaacaaaactatcgttctaccgccaatatcctaaacagcgcaaatgaattg
attgcaaacaatagtgatcgtcttggtaaaaatttatggacagagggcgaaaaaggcgat
cctgtgggcatctatgctgcttttaatgaattagacgaagcaaaatttgtcgcttcacaa
attcaggattgggtagaacatggcggaaaacttgatgattgcgctgtactttatcgtagt
aatagccaatcacgggttattgaagaagccttaattcgttgtcaaattccatatcgtatt
tatggcggtatgcgtttctttgaacgccaagaaattaaagatgcgttagcctatcttcgt
ttgattaataatcgtcaagatgatgcggcttttgagcgtgtaattaatacgccaacccgt
ggcattggcgaccgcactttagatatattgcgtaacttaacacgcgaacgccaaattacc
ttatggcaagcagtacaagtcgcaacacaagaaaatatgttggctgggcgagcctcaaca
gccttattacgtttccaagaattaattaattcattacaacttgatatcgcagaaatgcca
cttttcgcacaaactgattttgtgattaaacattcgggtttatatgaaatgtatcaacaa
gaaaaaggcgaaaaaggcgaagtgcgtattgaaaacttggaagaattagtcagtgcaacc
cgtgaatttatcaaacctgatgatgcagaagaaatgaccgaactcaccgcctttttaacg
cacgcttccttagaagctggcgaagaacaagcctctccgcatcaattctgtgtagaaatg
atgacgttacactctgcgaaaggcttagaatttcctcgtgtatttatggtgggcgtagaa
gaaggattattcccaagtttccgttcttttgaagaacctgggcgtttagaagaagaacgt
cgtttagcttacgtcggtattactcgcgcgaagaaaaaactgaccatctcttatgcggaa
agccgtcggttatatgcaaaagaagaacgccatttaccatcacgttttatcgcagaatta
ccgagagaatgtatccaagaaattcgtttacgagggactgtcacgcgtgcaatgaatcta
acaaaagtcggttcattgtcgaataccagtgcggtcgaaaatgaatggaaaatgggtcaa
aaagtcaaacatgaaaaattcggttttggcacagtcattaatgtcgaaggatcagataac
aatactcgcctccaaattgccttccaagcacaagggattaaatggctcattgcacatttg
gcaaaactggaaaaagtacggtag
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