Haemophilus influenzae 477: NTHI477_01271
Help
Entry
NTHI477_01271 CDS
T03720
Symbol
deaD
Name
(GenBank) Cold-shock DEAD box protein A
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hiw
Haemophilus influenzae 477
Pathway
hiw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hiw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NTHI477_01271 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hiw03019
]
NTHI477_01271 (deaD)
03009 Ribosome biogenesis [BR:
hiw03009
]
NTHI477_01271 (deaD)
Enzymes [BR:
hiw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NTHI477_01271 (deaD)
Messenger RNA biogenesis [BR:
hiw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NTHI477_01271 (deaD)
Ribosome biogenesis [BR:
hiw03009
]
Prokaryotic type
rRNA helicases
NTHI477_01271 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AJO88255
UniProt:
A0ABD6WRX9
LinkDB
All DBs
Position
1321678..1323519
Genome browser
AA seq
613 aa
AA seq
DB search
MTDKITFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFA
LPLLAQIDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRA
LKQGAQVVVGTPGRILDHIRRRTLNLSELRFIVLDEADEMLRMGFIDDVETVMAELPENH
QTALFSATMPEPIRRITKRFMNDPQEVKIKVNNENAPDIDQSCWYVHGVRKNEALLRFLE
VEDFDAAIIFARTKTGTLDITELLEKNGFRSAALNGDMTQQLREQTLDRLRNGSLDIVVA
TDVAARGIDIERISLVVNYDIPLDAESYVHRIGRTGRAGRSGRALLFVEPRERRLLRNIE
HLMKKGINEVELPNHLVLQECRRKKFVAKITKQLEHHDLEQYRSLLEDLFTADQDQEDIA
AAMLMLLQGKQKLILPPDPPMEKRRRERNDRGDRRENPRSAERRGERKGYGNPQPMDLYR
IEVGRADGVEVRHIVGAIANEGDINSRYIGHIKLYDDYTTVELPQGMPKELLQQFAKTRV
LNKQMQMSFLGAVKSDNSRGSDDFNGKRKGRGGDFRGERGRERGNDNRGNRKFNEKSNRT
FSDKPRRDRRSSF
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaaattacttttaatgacttaggcttacctgagttcatcttaaaagctgtt
tctgacttaggttttgaaacaccttctccaattcaacaatcttgtatcccacatttgctc
aatggcaatgatgtgctaggtatggcacaaacgggtagtggtaaaaccgctgcctttgca
ctgcctttactcgcgcaaatcgatccaagtgaaaaacatccacaaatgttagtgatggca
cctacacgcgaacttgctattcaagttgccgatgcgtgcgaactatttgttaaatatgca
cagggcactcgcattgttaccttatatggtggccaacgttatgacatccaacttcgtgca
ttaaaacaaggcgcacaagtggttgtgggtacaccaggccgtattcttgaccatattcgt
cgcagaacattaaatctttctgaacttcgttttatcgtattagatgaagccgatgaaatg
ctacgcatgggtttcattgatgatgtagaaaccgtcatggcagaattaccagaaaatcat
caaactgcgttattctctgcaacaatgcctgaaccgatccgtcgtattacgaaacgtttt
atgaatgatccacaagaagtgaagatcaaagtgaataacgaaaatgccccagatatcgac
caaagttgttggtatgtacacggcgtgcgtaaaaacgaagctcttcttcgtttcttagaa
gtggaagattttgatgcagcgattatttttgctcgcactaaaactggtactttagacatt
acagaactacttgaaaaaaatggtttccgttctgccgcacttaatggcgatatgacacaa
caattacgcgaacaaaccctcgatcgcttacgtaacggcagtttagatattgttgtggca
accgatgtggctgcacgcggtattgatattgaacgtatcagccttgtggtgaactacgac
attccgcttgatgcagaatcttatgtacaccgaattgggcgtactggtcgtgctggtcgt
tctggtcgtgctttattatttgttgaacctcgcgagcgtcgtttacttcgtaatattgaa
cacctaatgaaaaaaggtatcaatgaagtagaattgccaaatcatcttgtgttacaagaa
tgccgccgcaaaaaatttgtcgccaaaattacgaaacaactcgagcatcacgatttagaa
caatatcgtagtttattagaagacttattcacagccgatcaggatcaagaagatattgct
gcagcaatgttgatgctgcttcaaggcaaacaaaaattaattcttccacctgatccgcca
atggaaaaacgtcgtcgtgaacgtaatgatcgcggtgatcgccgtgaaaatccacgttca
gctgaacgtcgtggcgaacgtaaaggctatggaaatccacaaccaatggatttatatcgt
atcgaagtcggtcgtgcagatggtgtagaagttcgccatatcgttggtgcgattgctaac
gaaggcgatattaacagccgttatattggtcatattaaactttatgatgactacactacc
gttgaattgccacaaggtatgccgaaagaattattgcaacaattcgctaaaacacgcgta
ttgaataaacaaatgcaaatgtctttcttaggtgcagtaaaatccgataattcccgtggc
agcgatgattttaacggtaaacgtaaaggtcgtggtggcgatttccgtggagagcgcgga
cgtgaacgaggcaatgataatcgtggcaatcgtaaatttaatgaaaaaagtaaccgcact
tttagcgacaaaccacgccgtgatcgtagatcatcattctaa
DBGET
integrated database retrieval system
