Haemophilus influenzae 477: NTHI477_01341
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Entry
NTHI477_01341 CDS
T03720
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
hiw
Haemophilus influenzae 477
Pathway
hiw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hiw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NTHI477_01341 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hiw03021
]
NTHI477_01341 (rho)
03019 Messenger RNA biogenesis [BR:
hiw03019
]
NTHI477_01341 (rho)
Transcription machinery [BR:
hiw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NTHI477_01341 (rho)
Messenger RNA biogenesis [BR:
hiw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NTHI477_01341 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
NACHT
AAA_22
AAA_25
AAA
Motif
Other DBs
NCBI-ProteinID:
AJO88317
LinkDB
All DBs
Position
1389701..1390963
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AA seq
420 aa
AA seq
DB search
MHLTELKNTPVSDLVKLGEEQMGLENLARLRKQDIVFAILKQHAKSGEDIFGGGVLEILP
DGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLQTGDKIEGKIRPPKEGERYFALLKVDQV
NDDKPEVSRSKILFENLTPLHANSRLRMERGNGSTEDLTARILDLASPIGKGQRGLIVAP
PKAGKTMLLQNIAQSITHNYPDVELIVLLIDERPEEVTEMQRSVKGEVIASTFDEPATRH
VQVAEMVIEKAKRSVEHKKDVVILLDSITRLARAYNTVTPASGKILSGGVDANALHRPKR
FFGAARNVEEGGSLTIIATALVDTGSKMDEVIFEEFKGTGNMELHLSRKIAERRVFPAID
FKRSGTRKEDLLTTADELQKMWILRKILNPMDEVDAMEFLIDKLMMAKTNEEFFEVMKRS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatttaacagaacttaaaaatacgcctgtttctgatcttgtgaaactcggcgaggag
caaatgggcttagaaaatttagctcgtttgcgtaaacaagatattgtctttgcaatctta
aaacagcacgccaaaagtggcgaagatattttcggcggtggtgtgttagaaattttacca
gatggttttggtttccttcgttctgccgacagttcctaccttgcaggccctgatgatatc
tatgtttccccaagtcaaattcgccgttttaatcttcaaactggtgataaaatcgaaggt
aaaattcgtccaccaaaagaaggcgaacgctattttgcacttttaaaagttgatcaagtt
aatgatgacaaacctgaagtgtcccgtagcaaaatcttatttgaaaacttaacgccatta
catgctaactctcgtttaagaatggagagaggcaatggctcaacagaagatttgactgcc
cgtattttggatttagcatccccaattggtaaaggtcaacgtggtttgattgttgctccg
ccaaaagcaggtaaaaccatgttgctgcaaaatattgcgcaaagtatcacgcataattat
cctgatgtagagcttatcgtgttattgattgatgaacgcccagaagaagtgacagaaatg
caacgttcagtaaaaggcgaagtgattgcttctacttttgatgaacccgcaactcgtcac
gttcaagtggctgaaatggtaatcgaaaaagcgaaacgttctgtagaacataaaaaagat
gtggtcattttgcttgattctattactcgtttagcgcgcgcttacaatacagtcactcca
gcttcaggtaaaattttgtctggtggtgtggatgctaatgcgttgcatcgtccaaaacgt
ttctttggagctgcacgtaatgtggaagaaggcggcagtttaacgattattgcaacagca
ctagttgatactggttcgaaaatggatgaagttattttcgaagaatttaaaggtacaggt
aatatggaattacacctttctcgtaaaattgcagaaagacgcgtattcccagccattgac
tttaaacgctctggtactcgtaaagaagacttactcacaacagcggacgaattacaaaaa
atgtggattcttcgtaagattcttaatccaatggatgaagtggatgcaatggaattcttg
attgataagctgatgatggcgaaaaccaacgaagagttttttgaagtgatgaaacgttcg
taa
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