Haemophilus influenzae 723: NTHI723_00200
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Entry
NTHI723_00200 CDS
T03722
Symbol
sbcB
Name
(GenBank) Exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
hix
Haemophilus influenzae 723
Pathway
hix03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NTHI723_00200 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hix03400
]
NTHI723_00200 (sbcB)
Enzymes [BR:
hix01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
NTHI723_00200 (sbcB)
DNA repair and recombination proteins [BR:
hix03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NTHI723_00200 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NTHI723_00200 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NTHI723_00200 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AJO90670
UniProt:
A0AAJ8WS36
LinkDB
All DBs
Position
complement(168214..169635)
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AA seq
473 aa
AA seq
DB search
MAKDFSFFIYDYESFGVNPATDRPAQFAGIRTDADFNIIGKPIMFYCKQTNDYLPAPEAV
MVTGITPQECNEKGLSEPEFAANILAEFSQPNTCVMGYNNIRYDDEMTRYTFYRNFIDPY
EYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANGIEHENAHDAM
ADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGMLGNYRGNCT
WVAPLSWHPTNQNALIVCDLTGDIDNLLAKSADELRTDLYTKKSELEERGVSSVPLKLVH
INKCPILAPAKTLLPETANRLGIDRQLCLDNLAKLRASFDIREKVADIFNEERQFASNDN
VETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKRILELLFHYRARHFYKTLTRA
EQIKWQKYRQNKLEKSAVEFQSGLQRLAEEHSDNSEKLSLLQQVYEYGIKLLG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatttcagcttttttatttacgattatgaaagttttggtgtaaatccagca
acagatcgccctgcgcaatttgcgggtattcgtacagatgctgattttaatatcattggt
aaaccaataatgttttattgtaaacaaaccaacgattatttaccggctcctgaagccgta
atggtcacaggaattacgcctcaagaatgtaatgaaaaggggctttcagagcctgaattc
gccgcaaatatcttagcagaattttcccaacccaatacttgtgtcatgggttataacaat
attcgctatgatgatgaaatgacgcgttatacgttttatcgtaattttattgatccttat
gaatacagctggaaaaatgggaattcacgctgggatttgttagatttagtgcgagcctgt
tatgccttgcgtccagaaggaattaattgggcttatgacgatgatggaatgccaagtttc
cgcttagaaaaactcactaaagcaaatggtattgagcatgaaaatgctcacgatgccatg
gcggatgtatatgcaactattgctatggcgaaattaattaaagaaaaacagcctaaatta
ttccaatatttctttgaaaatcgcggtaaaaaagaaatcgaaaaattagttgatacaggc
gcaatgacacctttagtgcatgtttctggaatgctagggaattatcgtggaaattgcact
tgggttgcacctttatcttggcatccgacaaatcaaaatgcattaattgtgtgtgattta
actggcgatatcgataatttattagccaaaagtgcggatgaattacggacagatttatat
accaaaaaatctgaattagaagaaagaggagtttcatccgttccgttaaaacttgtgcat
attaataaatgtcctattttagcaccagctaaaactttgttaccagaaacagcaaatcga
ttgggtattgatcgacaattatgcttggataatcttgcaaaattacgagcatcttttgat
attcgtgaaaaagtggcggatatttttaatgaagaacgtcaatttgcatcgaatgataat
gtagaaactgagttatacaatggcttttttagcaatgctgataaaaataatatggctatt
ttacgtagtttacctgcagaaaaattatctgaacatggtttagcttttgaagataaacgt
atccttgaattattgttccattatcgtgctcgccacttttataaaaccctcacacgcgct
gaacaaattaaatggcaaaaataccgacagaataaacttgaaaaaagtgcggtagagttt
caatcaggtttacaacgtttagccgaggaacattcagataattctgaaaaactatctttg
ctacaacaagtatatgaatatggtataaaattactaggttag
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