Haemophilus influenzae 723: NTHI723_01161
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Entry
NTHI723_01161 CDS
T03722
Symbol
rpoD
Name
(GenBank) Sigma-70
KO
K03086
RNA polymerase primary sigma factor
Organism
hix
Haemophilus influenzae 723
Pathway
hix02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hix00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NTHI723_01161 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hix03021
]
NTHI723_01161 (rpoD)
Transcription machinery [BR:
hix03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NTHI723_01161 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
DNA_ligase_A_N
HTH_20
BUD22
SURF2
Motif
Other DBs
NCBI-ProteinID:
AJO91586
UniProt:
A0A2S9RG78
LinkDB
All DBs
Position
complement(1163786..1165657)
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AA seq
623 aa
AA seq
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MEKNQQSTAEQYSEQIEQLMELGRTQGYLTFAEINDLLPEDAIDPEYYDKLLQTLQNDAG
IPVLDEAPESDDMMLSDTIPDEDAVEEATQILSNVESEIGRTTDPVRMYMREMGTVDLLT
REDEISIAKRIEGGIDEVQTSIAAYPEALNGLLKNYDDVEKGNFRLTDLITGFVDPNAEI
EEHNGLDEDFSDEDDEEESSNADVEDNESESTSDSSDSDNSIDPEVAREKFQQLREQHSK
TLAVIEKHGRSGKRAQDQIALLGEIFKQFRLVPKQFDLLVLSMKEMMKRVRYQERQLQKI
LVDIAGMPKDDFEKIITTNGSNSEWVAKALKSSKPWAKRLIKYEDRIYEALNNLAITEEN
TKLTITQMRDICDAVARGEQKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNI
GLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQL
LQEMGREATPEELAERMGMPEDKIRKVLKIAKEPISMETPIGDDDDSHLGDFIEDSTLEL
PLDSATAQSLKVATHEVLEGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQI
EAKALRKLRHPSRSETLRSFLDE
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaatcaacaatctacggctgaacaatattcagaacaaattgagcaattgatg
gagctaggtcgtacacaagggtatttaacttttgctgaaatcaatgacttattgcccgaa
gatgctattgatccagaatattacgacaaattgctacaaacattgcaaaatgatgcaggt
atccctgtattagatgaagcaccagaaagcgatgatatgatgttgagtgataccatccct
gatgaagatgcagtggaagaagcaactcaaattctttcaaatgtagaatctgaaatcggt
cgaacaacggatcccgtacgcatgtatatgcgcgaaatgggaacggtggatcttcttact
cgtgaagatgaaattagcattgcaaaacgtattgaaggagggattgatgaagttcaaacc
tctatcgcagcctatcctgaagcattaaatggattactaaaaaattatgatgatgtagaa
aaaggtaatttccgtttgaccgatttaattacgggttttgttgatccaaatgccgaaata
gaagaacacaacggacttgatgaagacttttctgacgaagatgatgaagaagaatctagt
aatgcagatgtggaagacaatgaatcagaatctacatcagattcaagcgactctgataac
agtattgatcctgaagttgctcgcgaaaaatttcagcaattaagagaacagcactctaaa
acccttgctgttattgaaaaacacggtcgctctggaaaacgtgcccaagatcaaattgca
ctacttggcgaaatttttaaacaattccgtttagtaccaaaacaatttgatttactcgtt
ctatcaatgaaagaaatgatgaaacgtgtgcgctaccaagaacgtcagctacaaaaaata
ttagtggatatagcaggaatgccaaaggatgattttgaaaaaattattaccactaatggc
agtaacagtgaatgggtagcaaaagcattaaaatctagcaaaccttgggctaaacgttta
attaaatatgaagatcgtatttatgaagccttaaacaatctagcgataacagaagaaaat
actaaacttaccattactcaaatgcgtgacatctgcgatgcagtcgcacgaggcgaacaa
aaagcacgtcgagctaaaaaagaaatggttgaagctaacttgcgtttagtaatttccatc
gcgaaaaaatacacaaaccgaggtttacaattcttagatttaattcaagaagggaatatc
ggtttaatgaaagcggtagataaatttgaatatcgacgtggctacaaattctctacatat
gctacttggtggattcgtcaagcaatcactcgctctattgcggatcaagcgcgtacaatc
cgtattcctgtgcatatgattgaaacaatcaataaacttaatcgtatttctcgccagttg
ttacaagaaatgggacgggaagcaacaccagaagaattggcagaacgtatgggaatgcca
gaagataaaatccgtaaagtactgaaaattgcaaaagagccgatttctatggaaacacct
attggcgatgacgatgattcgcatttaggggattttattgaagattcaaccttagaactt
cctcttgattctgccacagcacaaagtttaaaagttgcaactcacgaagtgctagaaggc
ttgacgccacgtgaagcaaaagtattacgtatgcgttttggcattgatatgaataccgac
catacacttgaagaagtgggtaaacaattcgatgtaacacgcgaacgtattcgtcaaatt
gaagcaaaagcattacgtaaattacgtcatcctagccgttctgaaacactgagaagtttt
ttagatgaatag
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