| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
hix Haemophilus influenzae 723
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:hix00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NTHI723_01180 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:hix03021]
NTHI723_01180 (rpoC)
03400 DNA repair and recombination proteins [BR:hix03400]
NTHI723_01180 (rpoC)
Enzymes [BR:hix01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NTHI723_01180 (rpoC)
Transcription machinery [BR:hix03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NTHI723_01180 (rpoC)
DNA repair and recombination proteins [BR:hix03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NTHI723_01180 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1187055..1191305
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| AA seq |
1416 aa
MKDLVKFLKAQSKTSEDFDVIKIGLASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCA
RIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPVAHIWFLKS
LPSRIGLLLDMPLRDIERVLYFEMYIVTEPGMTDLERGQLLTEEQYLDAEDRWQDEFEAK
MGAEAIQDLLKGMDLEAECEKLREELQETNSETKRKKITKRLKLLEAFVQSGNKPEWMVM
TVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLIAPDIIVRNEKRML
QESVDALLDNGRRGRAITGSNRRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGP
YLHLHQCGLPKKMALELFRPFIYAKLESRGYATTIKAAKKMVEREEAIVWDILAEVIREH
PILLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLTLEAQLE
ARALMMSTNNVLSPANGDPIIVPSQDVVLGLYYMTREKVNGKGEGMLLQDPREAEKAYRT
GEAELHSRVKVRITEYVKNEAGEFDAKTTLTDTTIGRAILWMIAPKGMPYSLFNQTLGKK
AISKLINEAYRRLGLKEAVMFADQIMYTGFAYAARSGSSVGIDDMEIPAKKYEIISAAEE
EVAEIQEQFQSGLVTAGERYNKVIDIWAAANERVAKAMMENLSQEEVINREGNPEKQASF
NSIFMMADSGARGSAAQIRQLAGMRGLMARPDGSIIETPITANFREGLNVLQYFISTHGA
RKGLADTALKTANSGYLTRRLVDVAQDLVIVEDDCGTHEGLVMTPLIEGGDEKVPLRELV
LGRVAAEDILKPGAEEVLIPRNTLLDEKLCDVLDANSVDSVKVRSVVTCDTDFGVCAKCY
GRDLARGHLINQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASAAAKESSVQVKNTGTVH
LMNAKFVTNDESKLVLTSRNTELTITDAFGRTKEHYKVPYGAVLSKGDGQEVTAGETIAN
WDPHTMPVVSEVSGFVKFVDIIDGLTVMRQTDELTGLSSIVVQDVGERATAGKDLRPTIK
LVDANGNDIFLPETDVLAQYFLPGKAIVSLDDGAAVKVGEPLARIPQESVGTKDITGGLP
RVADLFEARKPKEPAILAEISGIVSFGKETKGKRRLLITPAEGETYEEMIPKWRQLNVFE
GEMVQRGDVISDGAETPHDILRLRGVRAVTEYIVNEVQDVYRLQGVKINDKHIEVIVRQM
LRKAVITKAYDSEFLEGEQVEVARVKIVNRQREAEGKPPVEFERELLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGFAYHQNRHKHRLVDDVVA
KLSEEDEAAIADEFVMTADDASANLAEMLNMADDAE |
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| NT seq |
4251 nt +upstreamnt +downstreamnt
gtgaaagacttagttaagtttttaaaagcacaatcaaaaaccagtgaagattttgatgtg
attaaaattgggttagcttccccagatatgatccgttcttggtcatttggtgaagtgaag
aaacctgaaaccattaactaccgtacgttcaaacctgaacgtgatggtcttttctgtgcg
cgtatcttcgggcctgtaaaagattacgaatgtttatgtggtaaatataaacgtttaaaa
caccgtggtgtgatttgtgaaaaatgtggtgttgaagtcactcaaactaaagttcgtcgt
gaacgtatgggtcatattgaacttgcatcgccagttgcacatatttggttcttaaaatca
ttgccgtctcgtatcggtttacttttagatatgccattgcgcgatatcgaacgtgtactt
tattttgaaatgtacatcgtgaccgaaccaggtatgacggacttagagcgcggtcaatta
ttaacagaagaacaataccttgacgctgaagatcgctggcaagatgaatttgaagcgaaa
atgggtgccgaagcgattcaagatctcttaaaaggtatggatcttgaagctgaatgtgaa
aaattacgtgaagaattacaagaaactaactctgaaactaaacgtaaaaaaatcactaaa
cgcttaaaattattagaagcatttgttcaatctggtaataaaccagaatggatggtgatg
acggtattgccagttcttccaccagatttacgcccattagtaccacttgatggcggtcgt
tttgcgacttcagatctgaacgatttatatcgtcgtgtaatcaaccgtaacaatcgttta
aaacgtttattagatttaattgcgccagatattattgtgcgcaacgaaaaacgtatgtta
caagaatctgttgatgccttattagataatggtcgtcgcggtcgtgcaattacgggttct
aaccgtcgtccattaaaatcattagcggatatgatcaaaggtaaacaaggtcgtttccgt
caaaatttattaggtaaacgtgttgattactctggtcgttctgtaatcactgttggccca
tacttgcacttacaccaatgtggtttaccgaagaaaatggcattggaattattccgtccg
tttatctatgcgaaattagaaagccgtggttatgctacgacaatcaaagcggctaagaaa
atggttgagcgtgaagaggcgatcgtttgggatattcttgcagaagttattcgtgaacac
ccaattctattgaaccgtgcgccaacacttcaccgtttgggtatccaagcgtttgaaccg
atcttaatcgaaggtaaagcgattcaattacacccactcgtttgtgcggcgtttaacgca
gacttcgatggtgaccaaatggcggtacatgttccattaacccttgaagcgcaattagaa
gctcgtgcgttgatgatgtccaccaataacgtgctttctccagcaaacggtgatcctatt
atcgttccatcacaagacgtggtattaggtctttactatatgacccgcgaaaaagtgaac
ggtaaaggcgaaggtatgttattgcaagatcctcgcgaagctgaaaaagcatatcgtaca
ggcgaagcagaattacattctcgtgtgaaagtacgtattactgaatatgtgaaaaatgaa
gcgggcgaatttgatgcgaaaaccacgctgactgatacaactatcggtcgtgcaatctta
tggatgatcgcgccgaaaggcatgccttattcattgttcaaccaaacattaggtaaaaaa
gccatttctaaactgattaacgaagcatatcgtcgtttaggtttaaaagaagcggtaatg
tttgctgaccaaattatgtataccggttttgcgtatgcggcacgttctggttcatcagtt
ggtattgatgatatggaaattccagcgaagaaatacgaaattatttctgcagcggaagaa
gaagtagctgagatccaagaacaattccaatcaggtcttgtgacggcaggcgaacgctat
aataaagtaatcgatatttgggctgccgcgaatgagcgcgtagcgaaagcgatgatggaa
aacttatctcaagaagaagtcatcaatcgtgaaggtaatcctgaaaaacaagcgtccttt
aacagtatctttatgatggctgattctggtgcgcgtggttctgcagcgcagattcgtcag
ttagcaggtatgcgtggtttgatggctcgtccagatggctcgatcattgaaaccccaatt
acagcaaacttccgtgaaggtttgaacgtattacagtactttatttcaacccacggtgct
cgtaaaggtttggcggataccgcattaaaaacagcgaactcaggttacttaactcgtcgt
ttagttgatgtggcacaagacttagtgattgtagaagatgactgtggtacgcacgaaggc
ttagtcatgaccccattaattgaaggtggagatgaaaaagtgccacttcgtgaattagta
ttaggtcgtgttgctgcagaagatattttaaaaccgggtgcagaagaagtattaattccg
cgtaacaccttattagatgaaaaactctgtgatgtgttggatgcaaactctgtagatagc
gtaaaagtacgttctgttgtaacttgtgatactgactttggcgtgtgtgcgaaatgttat
ggtcgtgatcttgcgcgtggtcatttaatcaaccaaggcgaagcggtgggggttattgcc
gctcaatctatcggtgagccgggtacacagctaacaatgcgtacgttccatattggtggt
gcggcatctgcggcagcgaaagaatctagtgtgcaagttaaaaacactggtacagtgcat
ttaatgaatgcaaaattcgtgactaacgatgaaagcaaactagtattaacttctcgtaac
acggaattaactattactgatgcatttggtcgtactaaagaacattataaagtgccttat
ggtgcggtattaagcaaaggtgacggtcaagaagtcactgcaggcgaaactatcgcaaat
tgggatccacatacaatgccagttgtctctgaagtatctggttttgtgaaatttgtagac
attattgatggtttaactgtgatgcgtcaaacagatgaattaacaggtttatcatcaatc
gtggttcaagatgtgggtgaacgtgcaactgcgggtaaagatttacgtccaactattaaa
ttagttgatgcaaatggcaacgatattttcttacctgaaactgatgttcttgcacaatac
ttcttacctggtaaagcaattgtaagtttagacgatggcgcagcagtgaaagtaggggaa
ccattagcacgtattccacaagaatctgtgggtactaaagatattactggtggtctaccg
cgcgttgcagatttatttgaagcacgtaaaccaaaagaaccagctatcttggctgaaatt
tctggtatcgtgtctttcggtaaagaaaccaaaggtaaacgccgtttattaattactcct
gcggaaggcgaaacttacgaagaaatgattccaaaatggcgtcagctcaacgtatttgaa
ggcgaaatggtacaacgtggcgatgtaatttctgatggtgctgaaacaccacacgacatt
ttacgtttacgtggcgtgcgtgcagtaactgaatacatcgtgaacgaagtgcaagatgtt
taccgcttacaaggggtaaaaatcaacgataaacatatcgaagttatcgttcgtcaaatg
ttacgtaaagcggtaattactaaagcttacgactcagaattccttgagggagaacaagtc
gaagtggctcgcgtgaaaattgttaatcgccaacgtgaagcagaaggtaaaccaccagtt
gaatttgaacgtgaattattgggtatcaccaaagcgtctcttgcgactgaatccttcatc
tctgccgcatcgttccaagaaactactcgtgttcttaccgaagcagcagtggcaggtaaa
cgtgatgaattacgtggcttgaaagagaacgtaatagtaggtcgattaattcctgcgggt
acaggttttgcgtatcatcaaaatcgtcacaaacatcgtttagttgatgatgtcgtagcg
aaattatctgaagaagatgaagctgctatcgctgatgaatttgttatgactgcagatgat
gcaagtgcgaacttagctgaaatgcttaacatggcagatgatgcggaataa |
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