Entry |
|
Symbol |
rnb
|
Name |
(GenBank) Exoribonuclease 2
|
KO |
|
Organism |
hix Haemophilus influenzae 723
|
Brite |
KEGG Orthology (KO) [BR:hix00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:hix03016]
NTHI723_01735 (rnb)
Enzymes [BR:hix01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NTHI723_01735 (rnb)
Transfer RNA biogenesis [BR:hix03016]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NTHI723_01735 (rnb)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1748834..1750813
|
AA seq |
659 aa
MFQDNPLLAQLKQQIHDSKEQVEGVVKSTDKAYGFLECDKKTYFIAPPSMKKVMHGDKIK
ATIEKQGDKEQAEPEALIEPMLTRFIAKVRFNKDKKLQVLVDHPSINQPIGAQQAKSVKE
ELQEGDWVVANLKTHPLRDDRFFYATINQFICRADDELAPWWVTLARHEQSRYPVQGAEH
YEMLDQKTRENLTALHFVTIDSESTMDMDDALYIEPIAQNSTQTGWKLVVAIADPTAYIA
LDSQIEQEAKQRCFTNYLPGFNIPMLPRELSDELCSLIANETRPALVCYIETDLAGNITA
KPHFVSAYVQSKAKLAYNKVSDYLEQADNAWQPETPETAQQIHWLHQFTKARIQWHKTHS
LLFKEKPDYAFVLAENGKVQEIKAEYRRIANQIVEEAMIIANICAAQFLHEQAKTGIFNT
HSGFDKKFLENAHHFLMANLANEQNQTELAERYSVENLATLNGYCQMRHDIEPIESDYLE
LRLRRYLTFAEFKSELAPHFGLGLEGYATWTSPIRKYSDMVNHRLIKAVLAKQPYEKTQN
DVLARLQEARRQNRLVERDIADWLYCRYLAPKVAENVEFNAEVQDVMRGGLRVQLLENGA
SMFIPASTLHNNKEEMQVNSDEIALYIKGERTYKIGDIVKVKLTEVKEATRSIVGEILQ |
NT seq |
1980 nt +upstreamnt +downstreamnt
atgtttcaagataatcctctactcgcacaacttaaacaacaaatccacgacagcaaagaa
caggttgagggcgtggtaaaaagcacagataaagcctacggttttttagagtgcgataaa
aaaacctatttcatcgcaccgccatcaatgaaaaaagtgatgcacggcgacaaaatcaaa
gccactattgaaaaacaaggcgacaaagaacaagccgagccagaagccttaattgagcca
atgctcacacgttttatcgcaaaagtgcggttcaataaagacaagaaattacaagtgctg
gtggatcacccaagcattaatcaacccattggtgcacaacaggcgaaatcggtaaaagaa
gaattgcaagagggcgactgggtcgtcgcaaatttaaaaacccatccattacgtgacgat
cgctttttctacgccacaattaatcagtttatttgccgagctgacgatgaattagcccct
tggtgggtcacattggcacgccacgaacaatcgcgctatcccgtgcaaggcgcagaacat
tatgaaatgttagatcaaaaaacacgcgaaaatctgaccgcacttcattttgtaaccatt
gattccgaaagcacaatggatatggacgatgccttatatatcgaacccatagcacaaaac
agcacacaaacaggctggaaattagtggtcgccattgctgacccaaccgcttacatcgcc
ttagattctcaaattgaacaagaagccaaacagcgttgcttcacaaattatttaccgggc
tttaacattccaatgttaccccgtgaattatccgatgaattatgttccttaatcgccaat
gaaacccgccccgcacttgtctgttatatcgaaaccgatcttgcaggcaacatcacagcc
aaaccgcattttgtttccgcttatgtacaatctaaagccaaactggcttataacaaagtg
tcggattatttagaacaggcagacaatgcatggcagccagaaacgccagaaacagcacaa
caaattcactggctacatcaatttaccaaagcccgcattcaatggcacaaaacccattcc
ttactctttaaagaaaaacccgattatgcctttgtgctggcagaaaacggcaaagtgcaa
gaaatcaaagcagaatatcgccgcattgccaatcaaattgtggaagaagcaatgattatt
gccaacatctgcgccgcacaatttttacacgaacaggcaaaaacaggcattttcaacacc
cacagcggttttgataaaaaattcttagagaacgcacaccatttcttaatggcaaattta
gccaatgaacaaaatcaaactgaactggcagaacgttattcagtagaaaacttagcaacc
ttaaacggctattgccaaatgcgccacgatattgaacccatcgaaagcgattatttagaa
ctgcgtttacgccgttatttaactttcgccgaatttaaatcagaattagcaccgcacttt
ggtcttggtttagaaggctatgccacttggacatcgcccatccgcaaatattcagatatg
gttaatcatcgcttaatcaaagccgtgctggcaaaacagccttatgaaaaaacacaaaat
gacgtgttggcacgtttgcaagaggctcgccgccaaaatcgcctcgtagaacgtgatatt
gcagattggctatattgccgttatcttgcaccgaaagtggctgaaaatgtggaatttaat
gcagaagtgcaagatgtaatgcgtggtggattacgtgtgcaattattagaaaatggcgcc
tcaatgtttatacctgcgtccactttacataataataaagaagaaatgcaggtgaattca
gatgagattgccctttatattaaaggcgaacgcacttataaaataggcgacattgtgaaa
gtgaaactcacagaagtgaaagaagcaactcgcagtattgtgggcgaaatacttcaataa |