Haemophilus influenzae R2866 (nontypeable): R2866_0351
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Entry
R2866_0351 CDS
T01981
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hiz
Haemophilus influenzae R2866 (nontypeable)
Pathway
hiz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hiz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R2866_0351 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hiz03019
]
R2866_0351 (deaD)
03009 Ribosome biogenesis [BR:
hiz03009
]
R2866_0351 (deaD)
Enzymes [BR:
hiz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
R2866_0351 (deaD)
Messenger RNA biogenesis [BR:
hiz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
R2866_0351 (deaD)
Ribosome biogenesis [BR:
hiz03009
]
Prokaryotic type
rRNA helicases
R2866_0351 (deaD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
Cas3-like_C_2
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
ADO80334
LinkDB
All DBs
Position
complement(341797..343638)
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AA seq
613 aa
AA seq
DB search
MTDKITFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLSGNDVLGMAQTGSGKTAAFA
LPLLAQIDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRA
LKQGAQVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLRMGFIDDVETVMAELPENH
QTALFSATMPEPIRRITKRFMNDPQEVKIKVNNENAPDIDQSCWYVHGVRKNEALLRFLE
VEDFDAAIIFARTKTGTLDITELLEKNGFRSAALNGDMTQQLREQTLDRLRNGSLDIVVA
TDVAARGIDIERISLVVNYDIPLDAESYVHRIGRTGRAGRSGRALLFVEPRERRLLRNIE
HLMKKGINEVELPNHLVLQECRRKKFVAKITKQLEHHDLEQYRSLLEDLFTADQDQEDIA
AAMLMLLQGKQKLILPPDPPMEKRRREHNERGDRRENPRSAERRGERKGYGNPRPMDLYR
IEVGRADGVEVRHIVGAIANEGDINSRYIGHIKLYDDYTTVELPQGMPKELLQQFGKTRV
LNKQMQMSFLGAVKSDNSRGGDDFNGKRKGRGGDFRGERGRERGNDNRGNRKFNEKSNRT
FSDKPRRDRRSSF
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaaattacttttaatgacttaggcttacctgagttcatcttaaaagctgtt
tctgacttaggttttgaaacaccttctccaattcaacaatcttgtatccctcatttgctc
agtggcaatgatgtgctaggtatggcacaaacgggtagtggtaaaactgctgcctttgca
ctgcctttactcgcgcaaattgatccaagtgaaaaacatccacaaatgttagtgatggca
cctacacgcgaacttgctattcaagttgccgatgcgtgcgaactatttgttaaatatgca
cagggcactcgcattgttaccttatatggtggccaacgttatgacatccaacttcgtgca
ttaaaacaaggtgcacaagtggttgtgggtacaccaggtcgtattcttgaccatattcgt
cgcggaacattaaatctttctgaacttcgttttatcgtattagatgaagccgatgaaatg
ctacgcatgggttttattgatgatgtagaaaccgtcatggcagaattaccagaaaatcat
caaactgcgttattctctgcaacaatgcctgaaccgatccgtcgtattacgaaacgtttt
atgaatgatccacaagaagtgaagatcaaagtgaataacgaaaatgccccagatatcgac
caaagttgttggtatgtacacggcgtgcgtaaaaacgaagctcttcttcgtttcttagaa
gtggaagattttgatgcagcgattatttttgctcgtactaaaactggcacgttagacatt
acagaactacttgaaaaaaatggtttccgttctgccgcacttaatggcgatatgacacaa
caattacgcgaacaaaccctcgatcgcttacgtaacggcagtttagatattgttgtggca
acagatgtggctgcacgcggtattgatattgaacgtatcagccttgtggtgaactacgac
attccgctggatgcagaatcttatgtacatcgaattggccgtactggtcgtgcaggtcgt
tctggtcgtgctttattattcgttgaacctcgtgagcgtcgtttacttcgtaatattgaa
cacctaatgaaaaaaggtatcaatgaagtagaattgccaaatcatcttgtgttacaagaa
tgccgccgcaaaaaattcgttgcaaaaattacgaaacaactcgagcatcacgatttagag
caatatcgtagtttattagaagacttattcacagccgatcaagatcaagaggatattgct
gctgcaatgttgatgctgcttcaaggcaaacaaaaactcattcttcctcctgatccgcca
atggagaaacgtcgtcgtgaacataatgaacgaggcgatcgccgtgaaaatccacgttca
gctgaacgtcgtggcgaacgtaaaggctacggaaatccacgaccaatggatttatatcgt
atcgaagtcggtcgtgcagatggtgtagaagttcgccatatcgttggtgcaattgctaac
gaaggcgatattaacagccgttatattggtcatattaaactttatgatgattacactacc
gttgaattgccacaaggtatgccgaaagaattattgcaacaattcggtaaaacacgcgta
ttgaataaacaaatgcaaatgtctttcttaggtgcagtaaaatctgataattcccgtggc
ggcgatgattttaacggtaaacgtaaaggtcgtggtggcgatttccgtggagaacgagga
cgtgaacgcggcaatgataatcgtggaaatcgtaaatttaatgaaaaaagtaaccgcact
tttagcgacaaaccacgccgtgatcgtagatcatcattctaa
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