Haemophilus influenzae R2866 (nontypeable): R2866_0845
Help
Entry
R2866_0845 CDS
T01981
Symbol
mfd
Name
(GenBank) Transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hiz
Haemophilus influenzae R2866 (nontypeable)
Pathway
hiz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
R2866_0845 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hiz03400
]
R2866_0845 (mfd)
Enzymes [BR:
hiz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R2866_0845 (mfd)
DNA repair and recombination proteins [BR:
hiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
R2866_0845 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRCF
DEAD
UvrB_inter
MFD_D3
Helicase_C
CarD_TRCF_RID
ResIII
ERCC3_RAD25_C
UB2H
SecA_DEAD
RecG_dom3_C
DUF6007
Motif
Other DBs
NCBI-ProteinID:
ADO80796
LinkDB
All DBs
Position
859008..862448
Genome browser
AA seq
1146 aa
AA seq
DB search
MKTAFFQPDIPTQPNDHKILGNVLQGADALAISEIAEQNQNLTVVVTPDTRSAVRLSRIL
SELSSQNVCLFPDWETLPYDTFSPHQEIISSRLSALFHLQNAKKGIFLLPISTLMQRLCP
PQYLQHNVLLIKKGDRLVIDKMRLQLEAAGYRAVEQVLEHGEYAVRGALLDLFPMGSAVP
FRLDFFDDEIDSIRTFDVDTQRTLDEITSINLLPAHEFPTDDKGIEFFRAQFRETFGEIR
RDPEHIYQQISKGTLISGIEYWQPLFFSEMATLFDYLPEQTLFVDMENNQTQGERFYQDA
KQRYEQRKVDPMRPLLSPEKLWLNVDEVNRRLKSYPRITFKAEKVRSSVRQKNLPVAALP
EVTIQSQQKEPLGQLRQFIEHFKGNVLFSVETEGRRETLLDLLSALKLKPKQIQSLEQIE
NEKFSLLVSSLEQGFIIEQSLPVAIIGEANLLGERIQQRSRDKRKTINPDTLVRNLAELK
IGQPVVHLDHGVGRYGGLVTLDTGGIKAEYLLLNYANESKLYVPVTSLHLISRYVGGSDE
SAPLHKLGNEAWAKSRQKAAEKIRDVAAELLDVYAQREAKKGFAFKYDREEFQQFSATFP
FEETYDQEMAINAVISDMCQPKAMDRLVCGDVGFGKTEVAMRAAFLAVMNHKQVAVLVPT
TLLAQQHYENFKDRFANLPVNVEVLSRFKTAKEQKQILENLAEGKVDILIGTHKLIQSDV
KFNDLGLLIIDEEHRFGVGQKEKIKQLRANIDILTLTATPIPRTLNMAMNGIRDLSIIST
PPARRLSIKTFVRQNDDLVVREAILREILRGGQVYYLHNDVASIENTAEKLTTLVPEARV
IVGHGQMRERELERVMSDFYHQRYNVLVCSTIIETGIDVPTANTIIIERADHFGLAQLHQ
LRGRVGRSHHQAYAYLLTPPPKMMTKDAERRLDALENLDNLGAGFILATHDLEIRGAGEL
LGNEQSGQIESIGFSLYMELLDAAVKALKEGREPSLEELTQQQADIELRVPALLPDDYLG
DVNMRLSFYKRIAAAESKAELDELKVELIDRFGLLPDATKNLLQITELRLLVEPLNVVRI
DAGTQGGFIEFSAKAQVNPDKFIQLIQKEPIVYRFDGPFKFKFMKDLSDNKVRLEFVVDL
LRTIAA
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacggcttttttccaacctgatattccaacccaacctaatgatcacaaaatttta
ggcaatgtcttacaaggtgctgatgcactggcgattagtgaaattgcagagcaaaatcaa
aatttaactgtagtagtcacaccagatacacgaagtgcggtacgtttatcacggatttta
tcggaattaagcagccaaaatgtatgcctttttcctgattgggaaaccttaccttacgat
accttttctccccatcaagaaattatttcctctcgtttaagtgcgcttttccatttacaa
aatgcgaaaaaaggcattttcttattgccgatttcgacattaatgcaacgcctttgcccg
ccacaatatttacaacacaatgtgcttctgattaaaaaaggcgatcgtttggtcatcgat
aaaatgcgcttacaattagaagcagcaggctatcgtgcggtagagcaagtattagaacac
ggcgagtatgccgttcgtggtgctttgttagatcttttcccaatgggaagtgcggttcct
tttcgtcttgatttttttgatgatgaaattgattccattcgcacttttgatgtggatacc
caacgtactcttgatgaaattacatcaattaatcttttaccggcgcacgaatttccaaca
gatgacaaagggattgaatttttccgtgcgcaatttcgtgaaacctttggcgaaattcgt
cgtgatcccgaacatatttatcagcaaatcagtaaaggtaccttgatttctggcattgaa
tattggcagccacttttcttttctgaaatggcgactttatttgattatttgccagaacaa
acgctgtttgtggatatggaaaacaaccaaacgcaaggcgagcgtttttatcaagatgcc
aaacagcgttatgaacaacgtaaagtggatccgatgcgtccgcttttatcgcctgaaaaa
ttatggctcaatgttgatgaagttaatcgccgattgaaatcttatccacgtattacattt
aaggcggaaaaagtgcggtcatcggtacgccagaaaaatttacctgttgccgctttacca
gaagtgaccattcaatcccagcaaaaagaaccattggggcaattacgccaatttattgag
cattttaaaggaaacgtactgttttcggtggagacggaaggtcgccgagagactttgctt
gatttactttcagcgttaaaactcaagccaaaacaaattcaatctttggaacagattgaa
aatgaaaaatttagcttgttagtcagctctcttgaacaaggttttataattgaacaatcg
cttcctgttgcgattattggcgaagctaatttacttggcgagcgcattcaacaacgttct
agagacaaacgtaaaacaattaatcctgatacgcttgtacgaaatcttgccgaactgaaa
atagggcagccagttgtacatcttgatcacggtgtggggcgttatggcggtttggtcacc
ttagatacaggtggcattaaagcagaatatttgctgctaaattatgcaaatgaatcgaaa
ctttatgtgccagtgacttcattacatttgattagccgttatgttggtggctctgatgaa
agtgcgccattacataaattagggaacgaggcttgggcgaaatcacgccaaaaagctgcg
gagaaaattcgtgatgtggcggcagagttattagatgtttacgcacaacgtgaagcgaag
aaaggctttgcctttaaatatgatcgtgaagaatttcaacaattttccgcaacctttcct
tttgaagaaacctacgatcaggaaatggcaattaatgcggtaatttcggatatgtgtcag
cctaaggcaatggatcgccttgtttgtggtgatgtgggttttggtaaaactgaagtggca
atgcgcgctgcctttttggctgtgatgaatcataagcaagtagcagtgctagtgccaacc
acactgttagcccaacagcattatgagaattttaaagatcgttttgcgaatttgcctgtg
aatgtcgaagtgttatcgcgtttcaaaactgcaaaagaacaaaaacaaattctggaaaac
cttgcagaaggaaaagtcgatatattaattggtacccataaattaattcaatcagatgta
aaatttaacgatcttggattgttgattattgatgaagaacatcgttttggtgtagggcaa
aaagagaaaatcaaacagcttcgtgcgaatatcgatattcttacgctaacggcaacgcca
attcctcgaacgcttaatatggcgatgaatggcattcgtgatctttccattatttccaca
cctcctgctcgccgattaagtattaaaaccttcgtccgtcagaatgacgatcttgttgta
cgagaagcgattttgcgtgaaattctccgaggtgggcaggtttattatctccacaatgat
gtcgcaagcattgaaaatacagcagaaaaactgaccacgcttgtgccagaggcgcgagta
attgtaggccacggacaaatgagagaacgtgagttagaacgtgtgatgagtgatttttat
catcagcgttataacgtcttagtttgttcaaccattatcgaaacgggtattgatgtacca
acggcaaataccattattattgaacgagcggatcattttggtttggctcagttgcatcaa
ttacgtggacgagtcgggcgttcacatcatcaggcttatgcttatttgcttacgccaccg
ccaaaaatgatgacaaaagatgctgaacgccgtctagatgcgttggaaaatcttgataac
cttggtgcaggttttatcttggcaacccacgatttagagattcgtggtgctggcgaatta
cttggaaacgaacaaagtggacaaattgaaagcatcggtttttcactttatatggaatta
ttggatgcagcggttaaagcgttaaaagaagggcgtgaaccatcattagaagaattgacg
caacaacaagcggatattgaattgcgtgtgcctgctttactgcctgatgattatctagga
gacgtgaatatgcgtttatccttttataaacgcattgctgcagcagagagtaaagcagaa
ttagatgaattaaaagttgagttgattgacagatttggattattgcctgatgcaacgaaa
aatttattacaaattacagagttgcgtttattggttgagccgttgaacgttgtgcgaatt
gatgctggaacacaaggcggttttattgagttttcagcaaaagcacaagtgaatccagat
aaatttattcaattaattcaaaaagaacctattgtgtatcgatttgatggcccattcaaa
tttaagtttatgaaagatctatccgataacaaagtgcggttagaatttgtggtggatttg
ttaagaacgattgctgcataa
DBGET
integrated database retrieval system
