Haemophilus influenzae R2866 (nontypeable): R2866_1024
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Entry
R2866_1024 CDS
T01981
Symbol
sbcB
Name
(GenBank) Exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
hiz
Haemophilus influenzae R2866 (nontypeable)
Pathway
hiz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
R2866_1024 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hiz03400
]
R2866_1024 (sbcB)
Enzymes [BR:
hiz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
R2866_1024 (sbcB)
DNA repair and recombination proteins [BR:
hiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
R2866_1024 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
R2866_1024 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
R2866_1024 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ADO80969
LinkDB
All DBs
Position
complement(1026273..1027694)
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AA seq
473 aa
AA seq
DB search
MAKDFSFFIYDYESFGVNPATDRPAQFAGIRTDADFNIIGEPIMFYCKQTNDYLPAPEAV
MVTGITPQECNEKGLSEPEFAANILAEFSQPNTCVMGYNNIRYDDEMTRYTFYRNFIDPY
EYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANGIEHENAHDAM
ADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGSMTPLVHVSGMLGNYRGNCT
WVAPLAWHPTNQNALIVCDLTGDIDNLLTKSADELRTDLYTKKSELEERGVSSVPLKLVH
INKCPILAPAKTLLPETANRLGIDRQLCLDNLAKLRASFDIREKVADIFNEERQFASNDN
VETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKRILELLFHYRARHFYKTLTRA
EQIKWKKYRQNKLEKSAVEFESSLQRLAEEHSDNSEKLSLLQQVYEYGIKLLG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatttcagcttttttatttacgattatgaaagttttggtgtaaatccagca
acagatcgtcctgcgcaatttgcgggtattcgtacagatgctgattttaatatcattggc
gaaccaataatgttttattgtaaacaaaccaacgattatttaccagctcctgaagccgta
atggtcacaggaattacgccgcaagaatgtaatgaaaaggggctttctgagcctgaattc
gccgcaaatatcttagcagaattttcccaacccaatacttgtgtcatgggttataacaat
attcgctatgatgatgaaatgacacgttatacgttttatcgtaattttattgatccttat
gaatacagctggaaaaatgggaattcacgctgggatttgttagatttagtgcgagcctgt
tatgccttgcgtccagaagggattaattgggcttatgacgatgatggaatgccaagtttc
cgcttagaaaaactcactaaagcaaatggtattgagcatgaaaatgctcacgatgccatg
gcggatgtatatgcaactattgctatggcgaaattaattaaagaaaaacagcctaaatta
ttccaatatttctttgaaaaccgaggtaagaaagaaatcgaaaaattagttgatacaggc
tcaatgacacctttagtgcatgtttctggaatgctagggaattatcgtggaaattgcact
tgggttgcacctttagcttggcatccgacaaatcaaaacgcactcattgtttgtgattta
actggcgatatcgataatttattaaccaaaagtgcggatgaattacggacagatttatat
accaaaaaatctgaattagaagaaaggggagtttcatctgttccgttaaagcttgtgcat
atcaataaatgtcctattttagcaccagctaaaactttgttaccagaaacagcaaatcga
ttgggtattgatcgacaattatgcttggataatcttgcaaaattacgagcatcttttgat
attcgtgaaaaagtggcggatatttttaatgaagaacgtcaatttgcatcgaatgataat
gtagaaactgagttatacaatggcttttttagcaatgctgataaaaataatatggctatt
ttacgtagtttacctgcagaaaaattatctgaacatggtttagcttttgaagataaacgt
atccttgaattattgttccattatcgcgctcgtcatttttataaaaccctcacacgcgct
gaacaaattaaatggaaaaaataccgacagaataaacttgaaaaaagtgcggtagagttt
gaatcaagtttacaacgtttagctgaggaacattcagataattctgaaaaactatctttg
ctacaacaagtatatgaatatggtataaaattactaggttag
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