Haemophilus influenzae R2866 (nontypeable): R2866_1654
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Entry
R2866_1654 CDS
T01981
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hiz
Haemophilus influenzae R2866 (nontypeable)
Pathway
hiz03030
DNA replication
hiz03430
Mismatch repair
hiz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R2866_1654 (dnaE)
03430 Mismatch repair
R2866_1654 (dnaE)
03440 Homologous recombination
R2866_1654 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hiz03032
]
R2866_1654 (dnaE)
03400 DNA repair and recombination proteins [BR:
hiz03400
]
R2866_1654 (dnaE)
Enzymes [BR:
hiz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R2866_1654 (dnaE)
DNA replication proteins [BR:
hiz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R2866_1654 (dnaE)
DNA repair and recombination proteins [BR:
hiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R2866_1654 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ADO81581
LinkDB
All DBs
Position
1687635..1691114
Genome browser
AA seq
1159 aa
AA seq
DB search
MSSQPRFVHLRTHTDFSMIDSIVKVKPLVKACAANEMVAMGLTDFTNFCGVVRFYGEMLS
SGMKPIIGADVKVKSTLCGDEYFYLTLLAKNNEGYKNITLLLSKAYQRGYNDLPYIDQDW
LIEHREGVIILSGGTQGDVGKKLLKENVAEIESAVAFYQEFFADHFYLALTRTGKPDEER
YIQAALKLAKSHGLPLVATNDVMFLKSDDFEAHEIRVAIHDGYTLDDPKRPKYYTSQQYF
RSEDEMCKLFADIPSALENTLLIAQRCSVTLRLGQYFLPQFPTGDLSTEDFLVQKSKEGL
EERLAFLFPDEKVRLEKRPKYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEHVAE
TYGRGAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPLDPGMTLAKAFEAEPQ
LQTAYDSDEEVQALIDMARKLEGVTRNAGKHAGGVVISPTLITDFSPLYCDNEGLHPVTH
FDKNDVEYAGLVKFDFLGLRTLTIIKWALDMINVRMVREGKPRVDIAAIPLDDPESFELL
KRAETTAVFQLESRGMKDLIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREE
VSYPDAEYQHESLKPILEPTYGIILYQEQVMQIAQVLAGYTLGGADLLRRAMGKKKPEEM
AKQRSVFKEGAVKNGVDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPA
EFMAAVMTSEMDNTDKIVGLYDECLRMGLKVTPPDINVGKHHFSVNEQGEIVYGIGAIKG
VGEGPIEALVTARNEGGIFKDLFDLCARVDLKKINRRTFESLIMSGAFDKLGPHRAALSK
NLEDALKASDQHAKDEAMGQTDMFGVLTETHEDVENAYANTPPYTEKQILDGERETLGLY
LSSHPVSRYLKELSHYTSTRLKDLAPNRRGQISTVAGLLVSSRIAITKKGNRLGIATLDD
RSGRLDLTLFGESLEQFGEKLQKDTVVVASGQVSFDDFSGGLKMAVRELMTLDEARSRYV
KSLAISLSEHQITPSFIKQLKALLEPVSGGTLPINVYYQSPKGRALLRLGVQWSIIPTDE
ILTELVNLLGESAVELEFE
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcccaacctcgtttcgtccatcttcgcacgcacacagatttttcgatgattgac
agtattgtcaaagtgaaacctttagtgaaagcctgcgcagctaatgaaatggtcgcgatg
ggattaacggattttactaatttttgtggtgtggtgcgtttttatggcgaaatgctttct
tcgggtatgaagccaattatcggtgcagatgtaaaagtaaaaagcacattgtgtggcgat
gaatacttttatcttactttgctggctaaaaataatgaaggctataaaaatattacttta
ttgttatcaaaggcttatcaacgaggttataacgatttaccttatattgatcaagattgg
ttaattgaacatcgtgagggcgtgattattttatcagggggaacgcaaggcgatgtgggt
aaaaaattgttgaaagaaaacgtagccgaaattgaaagtgcggtcgctttttaccaagaa
ttttttgctgatcatttttatcttgcacttacgcgtactggcaaaccagatgaagaacgt
tatatccaagcagcattaaaattagctaaaagtcatggattgcctttggtggcgacgaac
gatgtgatgtttttgaaatctgatgattttgaggctcatgaaattcgcgtagctattcac
gatggctatactttagacgatcctaaacgtccgaaatattatacctcacagcaatatttc
cgcagcgaagacgaaatgtgtaagctgtttgctgacattccttccgctcttgaaaatact
ttattaattgcgcaacgttgtagtgtcactttgcgccttggtcaatatttcttacctcaa
tttccaactggcgatttaagtacagaagatttcttagtacaaaaatccaaagagggcttg
gaagaacgtttagcttttttattccctgatgaaaaagtgcggttagaaaaaagaccaaaa
tatgatgaacgcttgcaggttgagctggatgtgattaaccaaatgggattcccaggttat
tttttgatcgtaatggaatttattcagtggtcgaaagataacgatattcctgttggacca
ggtcgtggttctggggcgggttcattagtggcttacgcattaaaaattactgatttagat
ccgctagaattcgatttactttttgaacgtttcttaaatccagaacgtgtgtctatgccc
gatttcgacgtggatttctgtatggatggtcgcgatcgcgtgattgaacacgttgcagaa
acttatggtcgtggtgcggtatcgcaaattattacctttggtacgatggcagcaaaagcg
gttattcgagatgtgggacgcgtattggggcatccttacggctttgtggatcgtatttct
aaattgattcctctagatccgggtatgacgcttgccaaagcatttgaagccgagccgcaa
ttacagactgcttacgatagcgatgaagaagtacaagcgttgattgatatggcacgtaaa
ctggagggcgtaacccgtaatgcaggtaaacatgcaggtggcgtggtcatttcgccaacc
ttaattactgatttttcaccactctattgtgataatgaaggcttacatccagttactcac
tttgataaaaatgatgtggaatatgcggggcttgtgaaattcgacttcttaggcttgcgt
actctcaccatcataaaatgggcattggatatgattaatgttcgtatggtgcgtgaaggc
aagcctcgagtagatattgccgccattccacttgatgatcctgaatcttttgaattactt
aaacgtgccgaaaccacagcagtattccagctggaatcgcgtggtatgaaagatttgatc
aaacgtctgcagccagactgttttgaagatatcatcgcattggtagcattgttccgtcct
ggcccgttgcaatcgggcatggtagataactttatcgaccgtaaacatgggcgagaagaa
gtatcttaccctgacgcagaatatcaacatgaaagcttgaaacctattcttgagccgact
tacggcattattttgtatcaagaacaagtgatgcaaattgcgcaagtgttggctggttat
acattgggtggagcagacttattgcgtcgagcgatggggaaaaagaaaccagaggaaatg
gcaaagcagcgttctgtgtttaaagagggggcggtaaaaaacggtgtggatggtgagctt
tccatgaagattttcgacttggtggaaaaatttgctggctatggttttaataaatctcac
tccgctgcttatgccttggtgtcttaccaaaccctttggctcaaaacccatttccctgca
gaatttatggccgcagtgatgacatctgaaatggataatacggataaaatcgtaggtttg
tacgacgaatgtttgcgtatgggcttaaaagtaacgccaccagatattaatgtcggcaag
caccattttagcgtcaatgaacaaggcgaaattgtatatggtattggtgcgattaaaggc
gtgggggaaggtccgatcgaagcacttgtgacggcaagaaatgaagggggtattttcaaa
gatttattcgatttatgcgctcgtgtagatttgaaaaaaattaaccgccgcacctttgaa
agcctaattatgtcaggtgcctttgataaattaggcccacatcgcgccgcactttctaag
aatttagaagatgcccttaaagcttctgatcaacatgcgaaagatgaagcaatgggacaa
acggatatgttcggcgtgctaactgaaacccatgaagacgtagaaaatgcctatgctaat
acaccgccttacaccgaaaaacaaattcttgatggcgaacgagaaaccttggggctttat
ttaagcagccatcctgttagccgttatttaaaagaactttcccattacacatcgacaagg
ttgaaagatcttgcaccaaatcgccgtggacaaattagcactgtggcgggattattggtc
tcatcacgaattgcaatcacaaaaaaaggcaatcgcttaggcattgctacattagacgat
cgctctggtcgcttagatttaacattatttggcgaaagcctagaacaatttggtgagaaa
ttacaaaaagataccgttgttgttgcttctgggcaagtgagctttgatgatttttctggc
ggcttaaaaatggcggtgcgagagttaatgaccttagacgaagcacgttctcgttatgtc
aaatccttagctattagtctttctgagcatcaaattacaccaagtttcattaaacaactt
aaagcattacttgagccagtgagtggtggaaccttgccgattaacgtgtattatcaaagt
ccgaaaggtcgtgcgttgttacgtttgggcgtgcaatggtcaattattccaacagatgaa
attctgacggaattggtgaatttacttggcgaaagtgcggtggaattagagtttgaataa
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