Halioglobus japonicus: BST95_01380
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Entry
BST95_01380 CDS
T04687
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
hja
Halioglobus japonicus
Brite
KEGG Orthology (KO) [BR:
hja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hja03009
]
BST95_01380
Enzymes [BR:
hja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BST95_01380
Ribosome biogenesis [BR:
hja03009
]
Prokaryotic type
rRNA helicases
BST95_01380
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
Helicase_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AQA17065
UniProt:
A0AAP8MBW8
LinkDB
All DBs
Position
279487..280896
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AA seq
469 aa
AA seq
DB search
MNSSFSELPLPPAQLENLEQIGYREMTPIQAASLPLTLAGQDLIAQAKTGSGKTASFALP
LLCKLNPRDFGAQALVLCPTRELATQVATEIRRLARYQANIKVVTLCGGQSIGPQIGSLE
HGGHIIVGTPGRIKDHLRKQTLDLSRVNTLVLDEADRMLEMGFAEDIGDIISTTPTSRQT
LLFSATYPDDIRRLSHRYQSDDVQMIKVAPQAEDQQIEQLFYICQPAARREALLQIIAQH
QPDRAVVFCNTKASVREVTQALSDAHDDALALHGDLDQRERDQVLVQFKHNSVRLLVATD
VAARGLDIDDLPAVINYDLPRETEQYVHRIGRTGRAGKSGLALSLFTDKERYRLDAIGQY
LDREVEFEAVETLRPTAASLPPPTFVTLAIAGGRKNKVRPGDILGALTREGGIEGNAVGK
IDVLEHVAYVAIERSQSKLALKQLSNGKIKGRKFKVRKLSLNRNRDQRG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaacagctccttctcagagctaccgctaccacctgcccagttggagaatctcgagcaa
atcggctatcgcgagatgacgccgatccaggctgcttcacttccgctcaccctggcgggc
caggatttgatcgcccaggccaaaaccggcagcggtaaaaccgcctcttttgccctgcca
ctgctctgcaagctgaacccccgggattttggcgcacaagccctggtgctgtgcccaacc
cgtgaactggccacccaggttgcaacagagatcaggcgactggcgcgctatcaggccaat
atcaaggtggtcaccctgtgtggcggccagtccatcggcccacaaattggctcacttgaa
cacggtggccacataatcgtgggcactcccgggcgaattaaagatcacctgcgtaaacag
acattggacctatcccgcgtcaacacactggtactggatgaggcggacaggatgctcgag
atgggctttgcagaggacatcggcgacatcatcagcaccacaccaacatcgcggcaaacc
ctgctattctctgccacctacccggacgatatcaggcgattgagccaccgctaccagtca
gacgacgtccagatgataaaggtggcgcctcaggccgaggaccagcagatcgagcaactg
ttctacatctgccagcctgccgccaggcgagaggccctactgcagattattgcccaacac
cagcccgacagggcagtggtgttctgcaacaccaaagcgagcgtgcgggaagtaacccaa
gctctcagcgacgcccacgatgacgccctggccctgcacggcgacctcgatcaacgcgaa
cgcgaccaggtgctggtgcaattcaagcacaacagcgtgcgcctgctggtggcgacggac
gtagctgcccgcggcctggacatcgacgacctccccgcagtgatcaactacgacctcccc
agggaaaccgagcaatacgtgcaccgcatcggccgtaccggcagagcaggcaagtccggc
ctggccctgagcctgttcacagacaaagagcgctatcgcctggatgcgatcggccaatac
cttgatcgcgaagtggaattcgaagccgtcgagacgctgcgccccacagcggccagtctg
ccaccgcccaccttcgtgaccctggccattgccggcggacgcaaaaataaggtacgtccg
ggagacatactcggtgcgttgacccgagaaggcggtatcgaagggaatgcagtgggcaaa
atagacgtgctggagcacgtggcttatgtcgccatcgagcggtcgcagtccaagctcgcc
ctgaagcagttgtccaacggcaagatcaagggccgcaaattcaaagtgcggaaactatcg
ctcaaccgcaaccgcgatcagaggggctga
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