Halioglobus japonicus: BST95_03895
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Entry
BST95_03895 CDS
T04687
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hja
Halioglobus japonicus
Pathway
hja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BST95_03895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hja03400
]
BST95_03895
Enzymes [BR:
hja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BST95_03895
DNA repair and recombination proteins [BR:
hja03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BST95_03895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
PriA-like_WH
AAA_30
AAA_19
Zn_ribbon_6
IBR_1
AAA_11
TrwB_AAD_bind
HypA
Motif
Other DBs
NCBI-ProteinID:
AQA17505
UniProt:
A0AAP8MD38
LinkDB
All DBs
Position
complement(807160..809349)
Genome browser
AA seq
729 aa
AA seq
DB search
MTILRLALPTPLRALFDYLPPAGSQSAQLRPGQRLSVPFGHRELCGVLVEVMADPQSTDF
ELKQASELLDPEPLLPKTLQKLCQWAADYYQHPIGEVLAAAFPTRLRKGNPHRGLTIPGW
QLTTQGKGLGEGALGRSPRQAEALAALRQQGPTSGQQLAAAGIKRPALKSLQDKGLAEPC
EISPAHCHASARPGLALNNEQAQALQALIATSEGFSCHLLEGVTGSGKTEVYLQLIAHCL
AQGKQALVLIPEIGLTPQTLARFEQRFDTDIAVLHSGLGEVQRERAWEAARTGIARIVIG
TRSAVLTPMVDPGLIVVDEEHDSSFKQQDGFRYSARDVAVKRGQLERCQVLLGSATPSLE
TLHNALQGRYQHHRLTERAGSGELPQLTVLDVRRQPLQAGLSEALVKAVGDTLARGEQSL
LFLNRRGFAPTVQCHDCGWIADCNHCDARLTLHRRQRRLRCHHCGHSEPLPGSCPQCRSE
QLLTQGVGTEQAEEFLRQRFPDTALYRVDSDSMQGREAMQALVDQVNEGQPCILLGTQML
TKGHHFPAVSLVGVIDMDALLFSGDFRGEERAAQLLTQVAGRAGRADTGGQVLIQTHHPE
HPCLQGTLSQTYHEQALAMLAERLERNLPPTGNLALLRSDCTDARQGEHFLQTLRHNAQR
QMPAGVALIGPLPAPMQRRAGRFRAQLLIHGGERAQVHRAARLLVSIAQRQKVARNLSWS
VDIDPQDMF
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
gtgaccatactgcgtctggccctgccaacgcccctgcgcgcgctgttcgactacctgccg
ccggcaggcagccaatcggcgcagctgcgcccggggcaacggctcagcgttccctttggc
caccgcgagctctgcggcgtgctggtggaagtcatggcagatcctcaatccaccgatttc
gagctcaagcaagccagcgagctgctggatccggaaccactgctaccgaagaccctccag
aaactctgccagtgggccgccgactactatcagcacccgatcggcgaagtcctggcggcg
gcgttccccacccgcctgcgcaaaggcaacccgcaccgcggcctgactattcccggctgg
caattaaccacccagggcaagggcctgggcgagggcgcactggggcgctcgccgcgtcag
gcagaggcgcttgcggccctgcgccagcaaggccccaccagcggccagcaattggccgcc
gcaggcatcaaacgcccggcgttgaaatccctgcaggacaaagggctagcagaaccctgc
gagatatctcccgcccactgccacgccagcgctcgaccgggcctggcgctcaacaacgaa
caggcgcaggcgctacaggcactgatagcaacctcagaggggttcagctgccatctgctc
gagggcgtcaccgggtcgggcaaaaccgaggtttatctgcagctgattgcccactgcctg
gcccagggcaagcaagccctggtcctgattccggaaattgggctcacgcctcagaccctg
gcgcggtttgagcagcgctttgataccgatatcgccgtattgcactcgggcctcggcgag
gtccagcgcgagcgggcctgggaggccgcgcgcaccggtatcgcacggattgtcattggc
acgcgctctgcggtgttgacccccatggtcgatcccggcctgatcgtggtcgacgaggaa
cacgacagctctttcaagcagcaggacggtttccgctattctgccagggatgtggcggta
aagcgcggccagctcgagcgctgccaggtcttgttgggcagtgccacgccctcattggag
accctgcacaatgcgctgcagggccgctatcagcaccaccgcctcaccgagcgagccggt
agcggcgagctcccccaactcaccgttctggatgtacgccgtcagccgctccaggccggc
ctgtcggaagccctggtcaaggccgtgggggatacactggcccggggcgaacagtccctt
ctgtttctcaatcggcgcggctttgctccgaccgtgcagtgccacgactgcggctggatc
gccgactgcaaccactgcgacgcacgcctgacgctgcatcgccgccagcgccgtctgcgc
tgccatcactgcggtcacagcgagccactgccgggtagctgcccacagtgccgcagtgag
caattacttacccagggagtgggcacagaacaagcagaagagtttctaaggcaacgattc
ccggacaccgccctgtatcgcgtcgacagcgattccatgcagggccgggaggccatgcag
gcgctggtcgatcaggttaatgaaggccagccttgcatattgctgggcacccagatgctt
accaagggccaccatttccccgcggtctccctggtgggcgtcatcgacatggatgcgctg
ttattcagcggcgattttcgcggtgaagaacgcgctgcccaactgctgacccaggtggcc
ggacgcgccggacgcgctgacaccggtggccaggtactgatccagacccaccaccctgag
catccgtgcctgcagggcaccctgagccagacctatcacgagcaagcactggccatgctg
gcggagcgcttagagcgcaacctgccaccgacgggcaacctcgccctgctgcgcagcgac
tgcaccgacgcccgccagggcgaacacttcctgcagacactgcgtcacaacgcccagcgt
cagatgcccgccggcgtggccctgattggcccgctacccgcccccatgcagcgccgggcc
ggtcggttccgggcccagttgctgattcacggcggcgagcgagcccaggttcaccgggcc
gcgcggctactggtcagtatcgcccagcgccagaaagtggcccgcaatctcagttggtcg
gtcgacatcgacccccaggacatgttctaa
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