KEGG   Halioglobus japonicus: BST95_04235
Entry
BST95_04235       CDS       T04687                                 
Name
(GenBank) ATP-dependent RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
hja  Halioglobus japonicus
Pathway
hja03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hja00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BST95_04235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hja03019]
    BST95_04235
   03009 Ribosome biogenesis [BR:hja03009]
    BST95_04235
Enzymes [BR:hja01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     BST95_04235
Messenger RNA biogenesis [BR:hja03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BST95_04235
Ribosome biogenesis [BR:hja03009]
 Prokaryotic type
  rRNA helicases
   BST95_04235
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 THB
Other DBs
NCBI-ProteinID: AQA17557
UniProt: A0AAP8MCW3
LinkDB
Position
877936..879690
AA seq 584 aa
MSTQAAVTSFSELALPEFLQKALADVGYETPSAIQAATIPALLEGRDVLGQAQTGTGKTA
AFALPALATLGPVGKSPQVLVLTPTRELAIQVAEAFQKYATYMDDFHVLPIYGGTDYRGQ
LRQLKRGVQVVVGTPGRVMDHMRRGSLDLSGLKTLVLDEADEMLRMGFIDDVEWILEQTP
EERQVALFSATMPEAIHRIATAHLNDPVEVAIEVQTVTNQSIRQRVWMMAGVHKLDALTR
ILEVEDFDAVIIFVRTRLATTELAEKLAARGYASAALNGDIPQKQRETTIEKLKSGKFDI
LVATDVAARGLDVERISHVVNYDIPYDVEAYVHRIGRTGRAGREGDAILFAANRERRLLR
AIEKSTGQTIEKMELPSAEEVTDKRIGKFKQRISESLDTAELDVFRKLVQDYQTEYGVPV
LEVAAALAAMVQGKKPLVAKPPAEKKQDKDKQKAKRAAKTSRDDGYDPREAKEKGQVASP
EKGMERFRIEVGHTHKVKPGNIVGAIANEAEIDAEYIGRIEIYDDHSTVDLPEGMPKELF
KHLKTVWVSGQRLQISRITEGEGKPRKKQGNKPKHRRKGKPPGK
NT seq 1755 nt   +upstreamnt  +downstreamnt
atgtctacgcaagcggcggtaaccagcttttcagagctggcccttcccgaattcctgcaa
aaagctctggccgacgttggctacgagacgccttccgctattcaggcggcgactattccc
gcgctgctggaaggacgcgacgtgctgggtcaggcccagacaggcacgggtaaaacggct
gcgtttgcgctgcctgcgcttgccacgctggggccggtgggtaagtcgccccaggtgctg
gtgttaacgcctacccgtgaactggctatccaggtcgccgaggctttccagaagtacgct
acgtatatggacgatttccatgtgctgcccatttatggcggtactgactatcgcggccag
ttgcgccagctcaagcgcggtgtacaggtggtggtggggacaccgggccgtgtcatggat
cacatgcgccgcggttccctggatttgtccggcctgaaaactctggtgctggatgaagct
gacgagatgctgcgcatgggtttcattgacgacgtagaatggattcttgagcagaccccc
gaggagcgtcaggtggcgctgttctccgcgactatgcccgaggccattcatcgcattgcc
accgcacacctgaacgacccggttgaagtcgccattgaagtgcagacggtcaccaaccag
tcaatccgccagcgcgtgtggatgatggccggcgtccacaagctcgatgcgctcacccgg
atccttgaggtggaggatttcgacgcggtgattatcttcgtgcggacgcgtctagctacc
accgagctcgccgagaagctggctgcccgcgggtacgcctcggcggccctcaatggtgac
attccgcagaagcagcgtgagacgacgattgagaaattgaagagcggcaagttcgacatt
cttgtggcaaccgatgtcgcggctcgagggctggatgtggagcgcatcagccacgtggtc
aactacgacattccctacgatgtagaagcctacgtgcaccgcattggtcgcaccgggcgt
gccggtcgggaaggtgacgccatcctgtttgcggctaaccgcgagcgacgcctgttacgt
gcgattgagaagtccactgggcagaccattgaaaagatggagctgccctctgccgaagag
gtcaccgacaagcgtatcggcaagttcaagcagcgtatttcagaatcgctcgataccgcc
gaactcgatgtgtttcgtaagttggtacaggactaccagaccgagtacggtgtgccggta
ctggaagtcgctgcggccctggcggccatggtgcagggcaaaaagcccctggtggccaag
ccccctgcggagaaaaagcaggacaaagacaaacagaaagcaaagcgcgcggccaagact
tcccgggacgacggctacgatcctcgcgaggccaaggagaagggccaggtcgcgtcgcct
gaaaaaggtatggagcgcttccggattgaagtgggccatacgcacaaggtcaagccgggc
aacattgtcggcgctattgccaatgaggcggagattgatgcggagtacattggccgcatt
gaaatctatgacgaccacagtaccgtcgacctgccggaagggatgcccaaggaattgttt
aaacacctcaaaacagtctgggtgagtggtcagcgcctgcagatttcccgtatcacagaa
ggtgagggcaagccgcgcaagaaacagggcaataagcccaagcatcggcgcaagggcaag
ccacccggtaagtga

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