Entry |
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Name |
(GenBank) ATP-dependent RNA helicase
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KO |
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Organism |
hja Halioglobus japonicus
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:hja00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BST95_04235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:hja03019]
BST95_04235
03009 Ribosome biogenesis [BR:hja03009]
BST95_04235
Enzymes [BR:hja01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BST95_04235
Messenger RNA biogenesis [BR:hja03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BST95_04235
Ribosome biogenesis [BR:hja03009]
Prokaryotic type
rRNA helicases
BST95_04235
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
877936..879690
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AA seq |
584 aa
MSTQAAVTSFSELALPEFLQKALADVGYETPSAIQAATIPALLEGRDVLGQAQTGTGKTA
AFALPALATLGPVGKSPQVLVLTPTRELAIQVAEAFQKYATYMDDFHVLPIYGGTDYRGQ
LRQLKRGVQVVVGTPGRVMDHMRRGSLDLSGLKTLVLDEADEMLRMGFIDDVEWILEQTP
EERQVALFSATMPEAIHRIATAHLNDPVEVAIEVQTVTNQSIRQRVWMMAGVHKLDALTR
ILEVEDFDAVIIFVRTRLATTELAEKLAARGYASAALNGDIPQKQRETTIEKLKSGKFDI
LVATDVAARGLDVERISHVVNYDIPYDVEAYVHRIGRTGRAGREGDAILFAANRERRLLR
AIEKSTGQTIEKMELPSAEEVTDKRIGKFKQRISESLDTAELDVFRKLVQDYQTEYGVPV
LEVAAALAAMVQGKKPLVAKPPAEKKQDKDKQKAKRAAKTSRDDGYDPREAKEKGQVASP
EKGMERFRIEVGHTHKVKPGNIVGAIANEAEIDAEYIGRIEIYDDHSTVDLPEGMPKELF
KHLKTVWVSGQRLQISRITEGEGKPRKKQGNKPKHRRKGKPPGK |
NT seq |
1755 nt +upstreamnt +downstreamnt
atgtctacgcaagcggcggtaaccagcttttcagagctggcccttcccgaattcctgcaa
aaagctctggccgacgttggctacgagacgccttccgctattcaggcggcgactattccc
gcgctgctggaaggacgcgacgtgctgggtcaggcccagacaggcacgggtaaaacggct
gcgtttgcgctgcctgcgcttgccacgctggggccggtgggtaagtcgccccaggtgctg
gtgttaacgcctacccgtgaactggctatccaggtcgccgaggctttccagaagtacgct
acgtatatggacgatttccatgtgctgcccatttatggcggtactgactatcgcggccag
ttgcgccagctcaagcgcggtgtacaggtggtggtggggacaccgggccgtgtcatggat
cacatgcgccgcggttccctggatttgtccggcctgaaaactctggtgctggatgaagct
gacgagatgctgcgcatgggtttcattgacgacgtagaatggattcttgagcagaccccc
gaggagcgtcaggtggcgctgttctccgcgactatgcccgaggccattcatcgcattgcc
accgcacacctgaacgacccggttgaagtcgccattgaagtgcagacggtcaccaaccag
tcaatccgccagcgcgtgtggatgatggccggcgtccacaagctcgatgcgctcacccgg
atccttgaggtggaggatttcgacgcggtgattatcttcgtgcggacgcgtctagctacc
accgagctcgccgagaagctggctgcccgcgggtacgcctcggcggccctcaatggtgac
attccgcagaagcagcgtgagacgacgattgagaaattgaagagcggcaagttcgacatt
cttgtggcaaccgatgtcgcggctcgagggctggatgtggagcgcatcagccacgtggtc
aactacgacattccctacgatgtagaagcctacgtgcaccgcattggtcgcaccgggcgt
gccggtcgggaaggtgacgccatcctgtttgcggctaaccgcgagcgacgcctgttacgt
gcgattgagaagtccactgggcagaccattgaaaagatggagctgccctctgccgaagag
gtcaccgacaagcgtatcggcaagttcaagcagcgtatttcagaatcgctcgataccgcc
gaactcgatgtgtttcgtaagttggtacaggactaccagaccgagtacggtgtgccggta
ctggaagtcgctgcggccctggcggccatggtgcagggcaaaaagcccctggtggccaag
ccccctgcggagaaaaagcaggacaaagacaaacagaaagcaaagcgcgcggccaagact
tcccgggacgacggctacgatcctcgcgaggccaaggagaagggccaggtcgcgtcgcct
gaaaaaggtatggagcgcttccggattgaagtgggccatacgcacaaggtcaagccgggc
aacattgtcggcgctattgccaatgaggcggagattgatgcggagtacattggccgcatt
gaaatctatgacgaccacagtaccgtcgacctgccggaagggatgcccaaggaattgttt
aaacacctcaaaacagtctgggtgagtggtcagcgcctgcagatttcccgtatcacagaa
ggtgagggcaagccgcgcaagaaacagggcaataagcccaagcatcggcgcaagggcaag
ccacccggtaagtga |