Halioglobus japonicus: BST95_06380
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Entry
BST95_06380 CDS
T04687
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hja
Halioglobus japonicus
Pathway
hja03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hja00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BST95_06380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hja03021
]
BST95_06380
03400 DNA repair and recombination proteins [BR:
hja03400
]
BST95_06380
Enzymes [BR:
hja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BST95_06380
Transcription machinery [BR:
hja03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BST95_06380
DNA repair and recombination proteins [BR:
hja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BST95_06380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AQA17919
UniProt:
A0AAP8MDP6
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All DBs
Position
1332158..1333162
Genome browser
AA seq
334 aa
AA seq
DB search
MQSAVTEFLTPRVINVDEKNATRAQVTLEPLERGFGHTLGNALRRILLSSMPGCAITEVE
IDGVLHEYSAIEGVNEDVIEILLNLKGVALVMNGKDEAELTLTKKGPGAVTAGDIQVDHD
IEIRNPDHVICHLNGDSEINMKLTVARGRGYSPADSRENPEEETRSIGRLQLDATFSPVH
RVSYVVDAARVEQRTDLDKLILDLETNGTIDPEEAIRRAATILQQQLAVFVDLESESESE
SVEEEDEVDPILLRPVDDLELTVRSANCLKAENIYYIGDLVQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKNDDRVLSV
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtgcagtgactgaatttttgaccccgcgagtaatcaacgttgatgaaaagaac
gctactcgcgcccaggtaaccctggaacccctggagcgcggctttggccacactctgggt
aacgccctgcgccgtatcctgctgtcttccatgcccggttgtgcaatcaccgaggtggag
atcgacggcgtattgcacgagtacagtgcaatcgaaggtgttaacgaagacgttatcgaa
atcctgctgaacctcaagggcgttgccctggtgatgaacggcaaggatgaagcagagctg
accctgaccaagaaaggcccgggtgcagtaactgccggcgacatccaggtggaccacgac
atcgagatccgcaacccggatcacgtgatctgccacctgaatggcgacagcgaaatcaac
atgaagctgactgtggcccgtggccgcggctactctcccgccgattctcgtgagaatccg
gaagaggagacccgctcgattggtcgcctgcagctggacgccaccttctcgccagtacat
cgcgtgtcctacgtggttgacgcggctcgtgtagagcagcgcaccgacctggacaagctg
attctggacctggagaccaacggcactatcgacccggaagaggcgatccgtcgcgccgcg
accatcctgcagcaacagctggccgtgtttgttgacctggagagcgaatctgagtctgag
tctgttgaggaagaggacgaagtagatcctattctgctgcgccctgtggacgatctggaa
ctgaccgttcgctccgccaactgtctcaaggcagaaaacatttactacatcggcgacctg
gtgcagcgcactgaggttgagctgctgaaaaccccgaacctgggtaagaagtcgctcacc
gagatcaaggatgtactggcttcacgtggtctgtccctgggtatgcgcctggacaactgg
ccgcccgccagcctgaaaaacgacgaccgggtactgagcgtttaa
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