Halioglobus japonicus: BST95_08780
Help
Entry
BST95_08780 CDS
T04687
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hja
Halioglobus japonicus
Pathway
hja03030
DNA replication
hja03430
Mismatch repair
hja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BST95_08780
03430 Mismatch repair
BST95_08780
03440 Homologous recombination
BST95_08780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hja03032
]
BST95_08780
03400 DNA repair and recombination proteins [BR:
hja03400
]
BST95_08780
Enzymes [BR:
hja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BST95_08780
DNA replication proteins [BR:
hja03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BST95_08780
DNA repair and recombination proteins [BR:
hja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BST95_08780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AQA18309
UniProt:
A0AAP8SNC4
LinkDB
All DBs
Position
1856443..1859931
Genome browser
AA seq
1162 aa
AA seq
DB search
MTSFVHLRLHSEYSIVDGLVRLKPLMGRVAELGMPAVAVTDFTNFYGLVKAYKAAFGAGV
QPIFGTDLRVMEADDPEKSYPMCLLAMNEAGYKNLTLLISQAYTDGQYLGEPYVRKAWLE
ECAEGVIALSAGAAGDVGHALLSDKPELARERAEYWMNLYPGRYYLELHRTGREGDETHL
HRAVALAGELECPVVATNDVRFLEASEFEAHEARVCIGEGRALDDPRRVRAYTDQQYLRS
PQEMQELFADIPEALANSVAIARRCNVVLELGKPYLPDYPIPDGMTMDEFFRQLSHDGLD
ARLEVLFDTSASDFPEVQQRYRERLDFELDTIVQMGFPGYFLIVMDFIRWAKEHDIPVGP
GRGSGAGSLVAYAMEITDLDPIEYDLLFERFLNPERVSMPDFDVDFCMEKRDKVIEYVAD
NYGREAVSQIITFGTMAAKAVVRDVARVQGKSYGLADKLSKMIPFEVGMTLEKALEQEEP
LREFLAEDDQAQEIWDMAEQLEGVTRGVGKHAGGVVIAPSKLTDFSPLYCDETGSGLVTQ
YDKGDVEDAGLVKFDFLGLRTLTIIDWAVKMINPARARAGEEPLDIMQIPLDDAPSFRLL
MSAETTAVFQLESRGMKDLIKRLQPDCFEDIVALVALFRPGPLQSGMVDNFINRKHGREE
ISYPDAQYQHEWLQPILQPTYGIILYQEQVMQIAQELAGYTLGGADMLRRAMGKKKPEEM
AKQRAIFEEGAQGKGVDGTLAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTCWLKTHYPA
PFMAAVMSSELDNTDKIVIFVEECRRMKLSLKLPDVNEGQYMFTVNEQDDIIYGLGAIKG
LGEGPIENILKAREEGGPFKDLFDFCARTDPRKVNRKAIEALIRSGALDSMGETRWVLMA
SMEDALKAAEQSASNRDAGIDDLFGEVVPSQGSGHEDVYAPFRNMRPWPDKERLGGEKDT
LGLYITGHPIDEYEREIRKFAPTRIADLRADKQGNQVLAGLIVAMRTMKTKRGDTMAILT
LDDRSARLEVTVYAEAFNEARELLGKDKIVIVEGKVAHDDYSGGLAMRVSGVRDLTQARQ
SYASALSLQLRGEQLNDTFVAQLQRTLESGRGGSCPVSMMYLQGHNQARFTCGENWRVSP
TDELLQSLRDQLGQDRVALEYR
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgtttgtgcatttacgcctccactccgagtattcaattgtcgatggcctggtg
cggctcaagcccctgatgggcagggtagccgagctgggcatgcccgccgtagcagtcact
gacttcaccaatttctacggcctggtaaaggcctacaaagctgcctttggcgccggtgtg
cagcccatttttggcaccgacctcagggtgatggaagccgacgatcccgagaagtcctac
cccatgtgcctactggccatgaatgaggccggttacaagaaccttacgctgctgatatcc
caggcctataccgatggccagtatctcggtgagccctatgtgcgcaaagcctggcttgag
gagtgcgctgaaggcgtgattgccctgtcggccggtgctgccggtgatgtgggccatgca
ctgctcagcgataagcccgagcttgcccgggagcgggctgagtactggatgaatctttac
cctgggcgctactacctcgagttgcatcgcaccgggcgtgaaggtgacgagactcatctg
caccgggccgtggcactggctggagaactggagtgtcccgtggtggcgacaaacgatgtg
cgcttcctggaggcctcagagtttgaggcgcatgaggcgcgggtgtgtattggtgagggc
agggcgctggacgacccgcgccgggtgcgcgcttataccgatcagcagtacctgcgctcg
ccccaggaaatgcaggagctgtttgcagatattcccgaagcactggccaactcggtagct
attgcccgccgttgtaacgtcgtgttggagttaggcaaaccgtatctgcccgattatccc
atccccgatggcatgaccatggatgagtttttccggcagttgtcccacgatgggttggat
gcgcgcctggaagttttgtttgataccagtgccagcgattttcccgaggtgcaacaacgc
tatcgcgagcgcctggattttgagctcgacaccattgtgcaaatgggtttccccggctac
ttcctgatcgtgatggactttatccgctgggccaaggagcacgatattcccgtcgggcca
gggcggggttccggtgccggttcgctggtggcctatgcgatggagattaccgacctcgat
cccatcgaatacgacctgctgttcgagcgcttccttaaccccgagcgggtatccatgcct
gactttgacgtcgacttctgtatggagaagcgcgacaaggttatcgagtacgtggcggat
aactacggccgcgaggccgtttcgcagattattacgttcggcaccatggccgccaaggcg
gtggtgcgcgacgtggcccgggttcagggtaagtcctacggcctggccgacaaactctcg
aagatgattccctttgaagtgggcatgaccctggaaaaagcgctcgagcaggaagagcca
ctgcgtgagtttcttgccgaggatgaccaggcccaagaaatctgggacatggccgagcaa
ctcgagggggtgacccggggtgtgggcaaacacgccggtggtgtggtgatcgcgccttcc
aaactgacggatttctcgccgctttattgcgacgaaacgggttccggcctcgtcacccaa
tacgacaagggcgacgtggaagacgccgggctggtcaagttcgacttcctcggcctgcgt
accctcacaatcatcgattgggccgtgaaaatgattaacccggctagggcgcgcgccggt
gaagagcctctggatattatgcagattccgctggacgacgcgcccagtttccgcctgctc
atgtccgccgagactaccgccgtgttccagctggaatcgcgcggtatgaaagatctgatc
aaacgcctgcagccagactgtttcgaggacattgtggcactggtggccctgttccgccca
ggcccactgcagtcgggcatggtagataactttatcaaccgcaagcacgggcgcgaggaa
atctcttaccccgacgcgcaataccagcacgagtggctgcagccgattctgcagcccacc
tacggcatcatcctgtaccaggagcaggtgatgcagatagcccaggagctggccggctat
accctgggtggtgcggatatgctgcgtcgtgccatgggtaagaaaaagcccgaggagatg
gccaagcagcgcgccatcttcgaagagggtgcccagggcaagggtgttgacggcaccctg
gccatgaagattttcgacctggtggaaaagtttgccggctacggttttaacaagtcgcac
tcggcagcatatgcactggtctcctatcagacctgctggctgaagacgcattaccccgca
ccatttatggcggcggtgatgagttcggaactcgacaataccgacaagattgtgatcttt
gtcgaagagtgccggcgcatgaagctgtcgctcaaactgcccgatgtgaacgaagggcag
tacatgttcaccgtgaacgagcaggacgatatcatctatggtctcggtgcgattaaaggc
ctcggtgagggcccgatcgagaatattctcaaggcccgtgaagagggcggtccatttaag
gacctgtttgatttctgtgcgcgcaccgatccgcgcaaggttaatcgcaaggcgattgaa
gctctgattcgttccggtgctctggactccatgggcgagacccgctgggtgctgatggcc
agcatggaggatgcactcaaggctgcagagcagagtgccagcaaccgggatgccggcatc
gatgatttgtttggcgaggtggtgcccagccagggaagcggccacgaggatgtgtacgca
ccgtttcgcaatatgcgcccctggcctgataaggagcgcctgggcggcgaaaaggacacg
ttggggctgtatattaccgggcatcccatcgacgagtatgagcgtgagatccgtaaattc
gcgccgacgcgcatcgccgatttacgtgccgacaagcaggggaatcaggtgctggccgga
ctgattgtggccatgcgcaccatgaagaccaagcgcggcgataccatggccattcttacg
ctcgatgatcgcagcgcgcgcctcgaagtcacggtgtacgccgaggcgtttaatgaggcg
cgtgagttgctcggtaaagacaagatcgtgattgtcgagggcaaggtggcccacgatgac
tattcaggtggcctggccatgcgcgttagcggcgtgcgcgatctgacccaggcccgccag
agctatgcctcagccctgagcctgcagttgcgcggcgagcaactcaatgacacatttgtt
gcccagttacagcgcaccctggagtcagggcgcggcggcagctgtccggtgtctatgatg
tacctgcagggccataaccaggctcgcttcacctgcggggagaactggcgtgtgtcgccg
accgatgaactgctgcaatcgctgcgcgaccagttaggtcaggacagagtggcgctggaa
taccggtga
DBGET
integrated database retrieval system
