Halioglobus japonicus: BST95_12405
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Entry
BST95_12405 CDS
T04687
Name
(GenBank) hypothetical protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hja
Halioglobus japonicus
Brite
KEGG Orthology (KO) [BR:
hja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hja03400
]
BST95_12405
Enzymes [BR:
hja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BST95_12405
DNA repair and recombination proteins [BR:
hja03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BST95_12405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AQA18922
UniProt:
A0AAP8SPY4
LinkDB
All DBs
Position
2614029..2617382
Genome browser
AA seq
1117 aa
AA seq
DB search
MSIVDATERHEALDVTQSFCVSAPAGSGKTELLIQRFLALLGRVQRPEQVLAITFTRKAA
AEMRERVVQAMADALHGVPCQGDHEQATRALALAALARSDELGWHLTRDNSRLNIKTIDS
FCAGLTRQLPILSQFGGSAQAVDDAVPLYREAVSELFSLLESARPEAEDLRQLLLHFDNN
WERLADLLMAMLAKRDQWHEHMGVRASPAESEQRLHSLVAALVDEKLAELAAVLAPFEDE
LFDLFCYAQGNLGEPVPDNFPTPVSDNLAQWRALVQLLLTQDGKYRRSVNVRNGFPAGKG
EAQEHKDHLKHLLGRMGEVAELLSALRAVTTLPDMGGHAASWQLVVHLAHVLPLVAACLL
LVFERRGEVDHTQVALSALDALGDDEQPTELALRLDYSIEHILVDEFQDTAINQYRLLGR
LTRGWGEHNRLNAQAPRTIFIVGDGMQSIYGFRNANVGLFLRARQSGFNGVIPVAIDLKS
NFRSSASVVDWVNATFEEAFPPEDDVRRSRVSYTPAVAVKPPLCEPAVELHGFRGESAAV
QEARYLVDQIVAGLDDEQFESIALLARSRGQLAAIIEELRLRNVGFAAEDMDPLAGSPAI
VDLLNLCRALANPADRVAWYGVLRAPWAGLDLQDLHCLASAAADARWQNLPALLRARQWP
EAFSERGQTVLERLAACFDWAWHKRDRLALRIWLEQLWLRLGGPQSLANPAYLEDAQRFF
ELLQECGEVCGRLDIAWLEQRIARLYASGEGGSAKLKVMTLHKSKGLEFDWVIIPALGRG
TRGDNRDILLWDDYISPTGERGFLLAADDHGDTKAPSLYNFLKSQRSEKSRLESTRLLYV
GATRAVKKLTLTSALKESAQASPGESAEIKPPSEGSLLSCIWPTFASQMQIHEAVEEAAL
GPVISVALQRVTTSPVLPTPPLAEREDGPNIPEPAFNRVDRHVGTVIHEQLEYLSAAQDL
PEQLGSENIERMALRLRELGVGGQLLEDALHRATQAVNTTLADSDTGRWVLSSAHNDAAS
ELEVVVVDAEGRTAELVIDRTFVDSRSGVRWIIDYKSSVPSAEESLDDFLEHEAVRYRPQ
LLRYRQCFSELAAEQVKCALYFTGLGRLQLVEVEAVS
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgagcattgttgatgccactgagcgccacgaggcattggacgtcacccaaagcttttgc
gtgtcggcaccagccggttcaggtaaaacagaactgttgatacaacgttttctggcgctg
ctgggtcgtgtacaacgccctgagcaggtattagccattacgtttacgcgtaaggcggcc
gcggaaatgcgtgagcgtgtggtacaggctatggccgacgcactccacggcgttccctgt
cagggagatcacgagcaggcgacccgggcgctggcattggctgccctggcacgcagtgac
gaactcggctggcacctcacgcgcgacaattcacgactgaatatcaagaccatcgactcg
ttctgtgcaggcttgacgcgccagctgccgattctgagccagttcggcggttcggcccag
gcggtggatgatgcagtgcctctgtatcgcgaggcggtatccgagctgttttcgctgctg
gagagcgcaaggccggaagcggaagacctgcgccagttgctgctgcacttcgacaataac
tgggagcgccttgcggatctgctgatggccatgctcgccaagcgcgatcagtggcatgaa
cacatgggcgtgcgggcctcaccggccgaatctgaacaacgtttgcactcactggtggca
gcattggtcgacgaaaagctcgcggagctggcggcggttttggcaccgtttgaagatgag
ctgttcgacttgttctgctacgcgcagggcaatctgggggagccggtaccggataacttc
cccacgcctgtgagtgacaacctggcgcaatggcgtgccctggtgcaattgttgcttacc
caggacggcaagtaccgacgctctgtgaacgtccgcaatggcttccctgccggcaagggt
gaggcccaggagcacaaggaccatctcaagcacctgctgggtcgtatgggagaggttgcc
gaattgttatccgccctgcgggcggtgacgacgctccctgatatgggagggcatgccgct
tcctggcaactggtagttcacctggcccatgtgctgcctctggtcgcagcgtgcctgctg
ctggtgttcgagcggcgcggcgaggtggaccatacccaggtggcactgtcggcactggat
gcactgggagacgacgagcagcccaccgagctggcgctgcggctcgactacagtattgag
cacattcttgtcgatgaatttcaggacaccgccatcaaccagtatcgcctgctggggcgg
ctgacccgtggctggggcgagcacaatcgcctgaatgcgcaggccccgcggaccattttt
attgtcggcgatggcatgcagtcgatttacggattccgcaatgccaatgtgggcctgttc
ctgcgcgctcgacaatccggttttaacggtgtgatcccggtggccatcgacctgaaaagc
aattttcggtcgagcgcttcggtggtcgactgggtgaatgcaaccttcgaggaagccttc
ccgccagaggacgatgtgcgtcgctcccgagtgagctatacgcctgcggtagcggtgaaa
ccgccgttgtgtgagcctgcagtagagctgcacggttttcgcggcgagagcgccgcagtg
caggaggcgcggtatcttgttgatcagatcgtggccggtctcgacgacgagcagtttgag
tcaatcgcattgctggcgcgttcgagggggcagttggcggccattatcgaagaattgcga
ctgcgtaacgtgggttttgccgccgaagatatggatcccctggcgggttccccggccatt
gttgacctgctcaacctgtgccgtgcgctggccaacccggctgatcgggtcgcctggtat
ggcgtgttacgtgcgccctgggcaggcctcgatctgcaggatttgcattgcctggccagc
gcagctgcagatgcacgctggcagaatctacctgcgttactgcgcgccagacagtggcct
gaagccttctccgagcgaggacagactgtgctagagcgcctcgccgcgtgcttcgactgg
gcctggcacaagcgtgaccgtcttgcgctgcggatttggcttgagcagctgtggttgcgg
ctcggcggaccacagtcccttgccaatccggcctacctggaagatgcgcagcgctttttc
gaactcttgcaggagtgcggcgaggtctgtggccgtctggacatcgcctggttggagcag
cgcatcgcgaggctctacgcctccggcgaaggcggcagtgcaaaattaaaagtgatgaca
ctgcataaatccaaggggctggaatttgattgggtcatcattccggcgctggggcggggc
acacggggtgataatcgcgatatcctgctttgggatgactacatcagtcccacgggagaa
cgcggcttcctgttggccgccgatgaccacggcgataccaaagccccgagcctgtacaac
ttcctgaaatcccaacgcagcgaaaaatcgaggctggaatccacgcgcttgctctatgtt
ggtgccactcgcgccgtgaagaaattgacgctgacgtcggctttgaaagaatctgcacag
gcctcgccgggagagtccgcagagatcaagccaccctctgaaggatcgttgctgagttgt
atatggcccacctttgccagtcagatgcagattcatgaagcggtagaggaggccgcctta
ggccctgtgatctcggtagcattgcagcgtgtcactacgtcgcctgtactgcccacgccg
cctctggcagagcgagaagacggccccaatattccggaacccgcctttaaccgcgttgat
cgccatgtggggacagtgattcacgagcagctggaatatctcagtgccgcacaggacctg
cctgaacagctgggatcagaaaatatcgagcgaatggccctgcgcctgcgtgaactcggg
gtaggcggacaactgctggaggatgcgctgcacagagcgacacaggccgttaacacgacg
cttgcagatagtgatactggccgatgggtactgagctctgcccacaatgacgcggccagt
gaattggaggtggtcgttgtagatgctgagggtagaacggcagaactggtgatcgaccgg
acctttgtagacagccgtagcggcgtacgctggattatcgattacaaaagcagtgtgccg
tccgccgaggaaagcctcgatgacttcctcgaacacgaggcagtgcgctaccgcccacag
ttgttgcgctaccgccagtgtttcagtgaactagctgctgaacaggtcaaatgtgcactg
tatttcactggcctcgggcggctgcaattggttgaggttgaagcggttagctga
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integrated database retrieval system
