Halioglobus japonicus: BST95_18505
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Entry
BST95_18505 CDS
T04687
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hja
Halioglobus japonicus
Pathway
hja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BST95_18505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hja03019
]
BST95_18505
03016 Transfer RNA biogenesis [BR:
hja03016
]
BST95_18505
Enzymes [BR:
hja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BST95_18505
Messenger RNA biogenesis [BR:
hja03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BST95_18505
Transfer RNA biogenesis [BR:
hja03016
]
Prokaryotic type
tRNA degradation factors
BST95_18505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
S1_2
Motif
Other DBs
NCBI-ProteinID:
AQA19941
UniProt:
A0AAP8SLG1
LinkDB
All DBs
Position
complement(3931115..3933238)
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AA seq
707 aa
AA seq
DB search
MNPVTKTFQYGGQTVTLETGRIARQATGSVLVTVENTSVLCTVVAEKTQREGRDFFPLAV
HYVEKTYSVGKIPGGFFKREARPSEKETLTSRLIDRPIRPLFPDGFMNEVQVVCTVMSAD
SSIDPDIPAMIGTSAALAISGAPFNGPIGGARVGFSEDTGYMLNPTYEQLAESKLDMVVA
GTTDAVLMVESEAKELTEDQMLGAVLYAHQEMQTVIQAINELAAEAGKPKWEWQAPAVNE
ELLTAVENQVKADLGDAYRITEKSERYARVGEIRDAAVEALVTEEGPSADEVKELFKKIE
KNLVRKRILAGEPRIDGRDTRTVRAIACEVDVLSKVHGSALFTRGETQAIGAVTLGSTRD
AQIIDALEGERRDPFMLHYNFPPYSVGEAGRVGFTSRREIGHGRLARRGLAAVLPGEEEF
PYTVRVVSEITESNGSSSMASVCVGSMSLMAAGVPLKAPVAGIAMGLVKDGNQFAVLTDI
LGDEDHLGDMDFKVAGTSEGVTALQMDIKIEGITAQIMETALEQAQQARLHILGQMNEVI
SEGRQVTSPNAPSMVTLKIDSDKIRDVIGKGGATIRSITEESGATVDIDDDGTVKIFGQN
QEARDKAVAMVEEITAEAEVGAVYTGTVARIVDFGAFVTILPGKDGLVHISQIANERVEN
VSDHLSEGQEVQVKVLDVDQRGRIKLSIKELLEDEAVEDSAEDAAED
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcctgtaactaagactttccagtacggtggacagaccgtcactctggaaaccggc
cgcatcgcccgtcaggcgactggttcggttctggtgaccgtcgagaatacctcagtactg
tgtaccgttgtcgcggagaagacccagcgcgaaggtcgcgacttcttccccctggctgtc
cactacgttgagaaaacctactctgtaggtaaaatccccggcggcttcttcaagcgtgaa
gcacgtcccagcgagaaagagactctgacgtcccgcttgatcgaccgcccgattcgtccg
ctgttccccgacggctttatgaacgaagtacaggttgtctgtactgttatgtccgcagac
agcagcatcgaccctgacatccccgcgatgatcggtacctcggctgcgctggcgatctcc
ggtgcgccgttcaacggccctatcggcggtgcgcgtgttggctttagcgaagacacgggc
tacatgctcaaccccacttacgaacagctggctgaaagcaagctggacatggtggttgcc
ggtactacagacgcggtactcatggttgaatcggaagccaaagagctgaccgaagaccag
atgttgggtgcggtactttacgcccaccaggaaatgcagaccgtgatccaggcgatcaac
gaactggccgctgaagctggcaagcccaagtgggagtggcaggcgcctgcagtgaacgaa
gagttgctgactgccgttgaaaaccaggtgaaagcagatctgggcgatgcctaccgcatt
accgagaagtctgagcgctacgctcgcgtcggcgagattcgcgacgcggcggtagaagca
ctggtcactgaagaaggcccctccgctgacgaagtgaaggagctgttcaagaagatcgaa
aagaacctggtgcgcaagcgcatcctggcgggcgagccccgcatcgatggtcgcgacacc
cgtactgttcgcgcgattgcctgtgaagttgacgtactgtccaaggttcacggttctgcg
ctgtttacccgtggtgaaacccaggccatcggcgccgttaccctgggttccactcgcgat
gcacagatcatcgacgcgttggaaggcgagcgtcgcgatccgttcatgctgcactacaac
ttccctccctactccgtgggtgaagcgggtcgtgtaggctttaccagccgtcgtgagatt
ggtcacggccgtctggcgcgtcgcggtctggctgcagtactgcccggtgaagaagaattc
ccctacactgtccgtgttgtatccgagatcactgaatccaacggttccagctctatggct
tccgtctgtgtcggttctatgtcgctgatggcggcaggcgtacctctgaaggcgccggta
gcaggtattgcgatgggcctggtgaaagacggcaaccagtttgccgtgctgaccgatatc
ctgggtgacgaagatcacctgggcgacatggacttcaaagtagccggtacctctgaaggt
gttacagcgctgcagatggacatcaagatcgaaggtatcactgcccagatcatggaaacc
gctctggaacaggcacagcaggcacgtctgcacatcctgggccagatgaacgaagtgatc
tctgaaggtcgccaggtgacttcacctaacgcgccttctatggtgaccctgaagatcgac
tccgacaagatccgcgacgtaatcggtaaaggtggcgcgactatccgctccattaccgaa
gaatccggcgctactgtcgacatcgacgacgacggcactgtgaagatcttcggccagaat
caggaagctcgcgacaaggcggtagccatggtcgaagagattactgctgaagcagaagtc
ggtgcggtttacaccggtactgttgcccgcatcgttgatttcggtgcgttcgttactatc
ctgcccggcaaagatggcctggtacacatctcccaaatcgccaatgagcgtgtggagaat
gtatctgaccacctgagcgaaggtcaggaagtacaggtgaaagtactggacgtagaccag
cgcggccgcatcaagctctccatcaaggaattgctggaagatgaggctgtcgaagattct
gctgaagacgctgccgaagactaa
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