Halioglobus japonicus: BST95_18515
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Entry
BST95_18515 CDS
T04687
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hja
Halioglobus japonicus
Brite
KEGG Orthology (KO) [BR:
hja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hja03016
]
BST95_18515
Enzymes [BR:
hja01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BST95_18515
Transfer RNA biogenesis [BR:
hja03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BST95_18515
Prokaryotic type
BST95_18515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AQA19943
UniProt:
A0AAP8MBE5
LinkDB
All DBs
Position
complement(3933832..3934761)
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AA seq
309 aa
AA seq
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MARRRRGRPIDGILVLDKPLGLSSNRALQTAKHLYFAAKAGHTGSLDPLATGVLPLCFGE
ATKFSQYLLDADKAYTSTFTLGTATASGDADGEILEQMDASHISECDVATALEQFRGEIE
QVPSMYSALKKDGQPLYKLARQGIEVERKSRRVVIKQLELREFRTGAAPEVDVYIECTKG
TYVRSIAEDLGKALECGAFVSALRRTKAGPFTLDDSVTLQTLEALKENEELRQMDELLMP
ADAALEAMPLVRLSESSGYYMRQGQPVMVPNAPCDGMVRVALETGEFLGIGEILDDGRVA
PRRLVVAAQ
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaggcgccgccgtggcagaccgattgatggcattctggttttggataagcccctg
gggctgagttccaaccgagcgctgcaaacggccaaacatttatatttcgccgccaaggcc
gggcacacaggtagcctagatccgctggcgacaggggtattacccctgtgctttggtgag
gccaccaagttttcccagtatttgctggatgcagacaaggcctataccagtacgtttacg
ctgggcaccgcaaccgccagtggcgatgccgatggcgaaatattggagcaaatggatgcc
agccacattagtgagtgcgatgtggcgacagcattggaacagtttcgaggtgagatcgaa
caggtcccctcgatgtactcggccctgaagaaggacgggcagccgctttacaagctggcg
cgtcaggggatcgaggtggagcgtaagtcgcgtcgggtggtaatcaaacagctggagctc
cgtgaattcagaaccggtgcagcgcctgaagtggatgtttatatcgagtgtaccaagggt
acctatgtacgctcgatcgccgaagacctgggtaaggctcttgagtgtggtgcgtttgtc
agcgcactgcgtcgcaccaaggcaggaccgttcacactggatgacagtgtgacgttgcag
acgctggaagccctcaaggagaatgaggagctgcggcaaatggacgagctgctgatgccg
gccgatgccgcattggaggccatgccgctggtgcggctgagtgagtccagtggatattac
atgcgccagggccaaccggtcatggtgccaaacgcgccctgtgatggtatggtgcgcgtc
gctctggaaaccggtgagtttttgggcattggagagatattggacgatgggcgcgtggcg
ccgcgtcgtctagtggtggccgcacaataa
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