Halalkalicoccus jeotgali: HacjB3_00090
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Entry
HacjB3_00090 CDS
T01271
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
hje
Halalkalicoccus jeotgali
Brite
KEGG Orthology (KO) [BR:
hje00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hje03016
]
HacjB3_00090
Enzymes [BR:
hje01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
HacjB3_00090
Transfer RNA biogenesis [BR:
hje03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
HacjB3_00090
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Motif
Other DBs
NCBI-ProteinID:
ADJ13411
UniProt:
D8J3S0
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All DBs
Position
complement(19327..20355)
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AA seq
342 aa
AA seq
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MNEPRGRIEEGVVRVAGDARQRYYDARGYGRPIEGNEIALAPVEAAHLLFRGDLRVEDMD
FPAFVRRFEDPTFLVRYLVYADLRERGFYLSPAREGWVSDPPADAHFVVYERGSGPWDDE
RLYELRVAGEREAIGVADLPGALAVVDEESEVTYFEVERPTMNGSSTGFSGTVEADLLAD
RAIAWDPPEGLFSAAFYGQPLSGRQGADGPIQLSLLEAAYLAERGSLSTDGSILERGRAV
EGERFERRLAVYTALRERGVVPKTGFKFGADFRVYADVTSVDDLGHSESLVRALPPGCAR
SPRELSLDVRLAHGVRKRMVFALASANDGTKPTFVSVGRLTP
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaccgcggggacggatcgaagagggggtggtccgcgtcgcgggcgacgcccgc
cagcgctattacgacgcccgtgggtacggccgcccgatcgagggcaacgagatcgcactc
gcccccgtcgaggcggcccacctgctctttcggggcgacctacgcgtcgaggacatggac
ttcccggcgttcgtccgccggttcgaggacccgaccttcctcgtgcgctatctcgtctac
gccgacctccgcgagcgggggttctatctctcgcccgcgcgcgagggctgggtttccgac
ccgcccgccgatgcccacttcgtcgtctacgagcgcggttcggggccgtgggacgacgag
cgcctgtacgaactgcgggtcgccggcgagcgcgaagcgatcggggtggccgatctgccg
ggcgcgctcgcggtcgtcgacgaggagagcgaggtgacctacttcgaggtcgaacgaccg
acgatgaacggttcctcgacggggttctccggaaccgtcgaggccgacctgctcgcggac
cgggcgatcgcgtgggacccgcccgagggactgttctcggcggcgttttacggccagccg
ctttccggtcgtcagggtgcggacggcccgatccagctctcgcttctcgaggccgcgtat
ctcgccgaacgtggctcgctctcgacggacgggtcgatcctcgaacgcggccgggcggtc
gagggcgagcgcttcgaacgccggctcgcggtctacaccgcgctccgcgagcgtggggtc
gtccccaagaccggtttcaagttcggcgcggactttcgggtgtacgcggacgtgacgtcg
gtcgatgatttgggtcactccgaatccctcgtccgggcgctccctccggggtgtgcccgt
tcgccccgggaactctcgctcgacgttcggctcgctcacggggtgcgcaaacgaatggtt
tttgcgctggcgagcgcgaacgacggtacgaagccgaccttcgtctcggtcggcagactc
acaccatga
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