Halalkalicoccus jeotgali: HacjB3_00285
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Entry
HacjB3_00285 CDS
T01271
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
hje
Halalkalicoccus jeotgali
Pathway
hje03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hje00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HacjB3_00285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hje03021
]
HacjB3_00285
Transcription machinery [BR:
hje03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HacjB3_00285
Prokaryotic type
Archaeal type
TFB
HacjB3_00285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
ORC6_2nd
Zn_ribbon_6
DZR_2
RB_B
Motif
Other DBs
NCBI-ProteinID:
ADJ13450
UniProt:
D8J3V9
LinkDB
All DBs
Position
65859..66743
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AA seq
294 aa
AA seq
DB search
MATKIPSNCPECNGTLTTRGGETTCSDCGLVVSEERIDPGPEWRSFEDERTDRRRTGAPL
SRSRHDYGLSTEIGYSGSNRASGRKRRLYARLRRQHKRSHCRSKAERNRRDVFMQIRRLT
AALSLPDSIRDQACTLFRSAQEARIVTGRSLEGFTAATVYAACRVHGVSRIRAEVLEASR
ASRSELDAAYGAMDRELGLPVGPLDPDEYIPRFGTRLDLSVEVRNRGSELLESAVESELI
GGHNPAGVAAACLYTAAKEREADVTQKQAAAVADVSPPTIRVTYQALREAELVG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcaactaagataccttcaaattgtcctgaatgtaatggaacgctgaccactcgcggc
ggggagacgacgtgttcggactgtgggctggtcgtcagcgaagagcggatcgatcccggg
cccgagtggcggtcgttcgaggacgagaggaccgaccgtcgacgaacgggtgcgcccctc
tcgcgatcgcgccacgattacgggctctcgacggagatcggatacagcggatcgaaccgc
gccagcgggcgcaaacgacggttatacgcccgacttcgcagacagcacaaacgctcgcac
tgtcgcagcaaggccgagagaaaccggcgcgacgtgttcatgcagattcgtcgtctgacc
gccgcgctgtcccttcccgactcgattcgtgaccaggcgtgtacgctgtttcgttccgca
caggaggcgaggatcgtgacggggcgctcgctggagggctttaccgccgcaacagtgtac
gcggcctgtcgagtccacggcgtctcgcggatccgtgccgaggtgctcgaggcctcgcgt
gcctcccgatcggagctcgatgcggcctacggcgcgatggatcgcgagctcgggctgccg
gtcgggccgctcgaccccgacgagtatatcccgcgattcgggacccgtttggacctctca
gtcgaagtgcgaaatcgcgggagcgaactgctcgaatcggcagtcgagagcgaactgatc
ggcgggcacaaccccgcgggcgttgcggcggcctgtctgtacaccgccgccaaggaacgc
gaggcggacgtcacccagaagcaggccgccgccgtcgccgacgtgagcccgccgacgatc
cgggtcacctatcaggcgctccgtgaggccgaactcgtcggctaa
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