Halalkalicoccus jeotgali: HacjB3_02110
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Entry
HacjB3_02110 CDS
T01271
Name
(GenBank) TATA-box binding family protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
hje
Halalkalicoccus jeotgali
Pathway
hje03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hje00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HacjB3_02110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hje03000
]
HacjB3_02110
03021 Transcription machinery [BR:
hje03021
]
HacjB3_02110
Transcription factors [BR:
hje03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
HacjB3_02110
Transcription machinery [BR:
hje03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
HacjB3_02110
RNA polymerase III system
TFIIIB
HacjB3_02110
RNA polymerase I system
SL1/TIF-1B
HacjB3_02110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
T4bSS_IcmS
EB1
Motif
Other DBs
NCBI-ProteinID:
ADJ13815
UniProt:
D8J609
LinkDB
All DBs
Position
complement(408635..409192)
Genome browser
AA seq
185 aa
AA seq
DB search
MDPKETINIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRS
GKIVCTGAKSTDDVHESLQIVFDKLRDLEIQVQDDPEIVVQNIVTSADLGRNLNLNAIAI
GLGLENIEYEPEQFPGLVYRLDEPKVVALLFGSGKLVITGGKQPVDAEHAVDKIVSRLED
LGLLE
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaaggagacaatcaacatcgaaaacgtcgtcgcgtcgacgggcatcggacag
gaactcgatctccagagcgtggcgatggacctcgaaggggccgactacgaccccgagcag
ttccccgggctagtgtatcgcacgcagaacccgaaatccgcggcactcatctttcgctcg
ggcaagatcgtctgtacgggcgcaaagagcaccgacgacgtccacgagagcctccagatc
gtcttcgataagctgcgcgatctggagatccaggtgcaggacgaccccgaaatcgtcgtc
cagaacatcgtcacctcggcggacctgggccggaacctcaacctgaacgcgatcgcgatc
gggctcggcctcgagaacatcgagtacgaacccgagcagtttcccgggctggtctaccgg
ctcgacgagccgaaggtcgtcgccttgctctttggctcgggcaaactcgtgatcacgggc
ggcaaacagcccgtcgacgccgaacacgccgtcgacaagatcgtctcccgactcgaggac
ctgggcctcctcgagtag
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