Halalkalicoccus jeotgali: HacjB3_03900
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Entry
HacjB3_03900 CDS
T01271
Name
(GenBank) DNA-directed RNA polymerase subunit E, RpoE2
KO
K15171
transcription elongation factor SPT4
Organism
hje
Halalkalicoccus jeotgali
Pathway
hje03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hje00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
HacjB3_03900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hje03021
]
HacjB3_03900
03019 Messenger RNA biogenesis [BR:
hje03019
]
HacjB3_03900
Transcription machinery [BR:
hje03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
HacjB3_03900
RNA polymerase I system
HacjB3_03900
Messenger RNA biogenesis [BR:
hje03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
HacjB3_03900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
DZR
Zn_ribbon_15
Zn_Ribbon_1
zf-ChsH2
HypA
DZR_2
Zn_Ribbon_TF
zf-RING_4
DUF7459
Zn_ribbon_3
DUF7129
DUF5817
NRDD
Zn_ribbon_RRN7
DUF7573
Motif
Other DBs
NCBI-ProteinID:
ADJ14171
UniProt:
D8J858
LinkDB
All DBs
Position
complement(777158..777355)
Genome browser
AA seq
65 aa
AA seq
DB search
MARNRKVCRDCHRVVDPDTNACPSCGSTSFTEDWAGYVVIAHPEDSEIAREMQVTEAGEY
ALKVR
NT seq
198 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaaccgaaaggtctgtcgggactgccatcgcgtcgtcgatcccgacaccaac
gcctgcccgtcgtgtggatcgacctcctttaccgaggactgggcgggctacgtcgtgatc
gcccaccccgaggacagcgagatcgcccgcgagatgcaagtcaccgaagccggcgagtac
gcactgaaagtccgttga
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