Halalkalicoccus jeotgali: HacjB3_04495
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Entry
HacjB3_04495 CDS
T01271
Name
(GenBank) AAA family ATPase, CDC48 subfamily protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hje
Halalkalicoccus jeotgali
Pathway
hje04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hje00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
HacjB3_04495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hje03019
]
HacjB3_04495
03009 Ribosome biogenesis [BR:
hje03009
]
HacjB3_04495
04131 Membrane trafficking [BR:
hje04131
]
HacjB3_04495
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hje04147
]
HacjB3_04495
Messenger RNA biogenesis [BR:
hje03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
HacjB3_04495
Ribosome biogenesis [BR:
hje03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
HacjB3_04495
Membrane trafficking [BR:
hje04131
]
SNARE
SNARE associated proteins
Others
HacjB3_04495
Autophagy
Aggrephagy
Other aggrephagy associated proteins
HacjB3_04495
Exosome [BR:
hje04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HacjB3_04495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
CDC48_2
AAA_5
RuvB_N
AAA_22
TIP49
AAA_2
AAA_33
AAA_14
nSTAND3
NPHP3_N
RNA_helicase
IstB_IS21
AAA_lid_PRS2_C
AAA_28
Mg_chelatase
AAA_7
Sigma54_activat
AAA_18
AAA_3
ABC_tran
DUF815
AAA_17
ATPase
AAA_24
NB-ARC
Parvo_NS1
AAA_30
TsaE
AAA_11
SLFN-g3_helicase
NACHT
KAP_NTPase
PhoH
IPT
Vps4_C
Motif
Other DBs
NCBI-ProteinID:
ADJ14290
UniProt:
D8J8V5
LinkDB
All DBs
Position
876293..878518
Genome browser
AA seq
741 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGGDTTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVTIRKADATKAEKLVLAPPEEASVQFGSDAAGMVKRQIL
KRPVVERDIVPVMSSTNHPFMRSPGQAIPLIAVETEPEGVCLITEDTDVELREEPISGFE
KAGSGITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREISIDVPDEV
GREEILQIHTRGMPLSDDVSLSELADDTHGFVGADIESLTKEAAMRALRRYLPEINLDEE
EVPPELIDRMIVKRGDFRGALGEVEPSAMREVLVELPKISWNDVGGLEDAIGDIKESVEW
PLTNPERFDRLGIDPPAGVLLYGPPGTGKTLMAKAVANETNANFISIRGPQLLSKWVGES
EKAIRQTFRKARQVSPTVIFFDELDSLAPARGGEVGSNVSERVVNQLLTELDGLEEMENV
MVIAATNRPDMIDPALIRSGRFDRLVMVGQPGEEGRKEILEIHTQDIPLAADVSLRELAE
ITDGFVGSDLASIAREAAMTALREDRDADVVEMRHFRGAMESVRPTITDDILGYYEQIKD
EFAGGTAEPGRNRQGSRIGFQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagtacaactcgaggtcgcgaaagcctacccgaacgactcgggcaggggcatc
gcccgcctcgatccggacacgttgttgcacctgaagctgagccccggagacatcatcgag
atcgaaggcggcgacacgaccgccgcgaaggtctggcgcgccgatcgccaggactggaac
accgacaccgtcaggatcgacgggttcacccgccagaacgccgacgtcggtatcggcgag
cgcgtcaccatccgcaaggccgacgcgacgaaggccgagaagctggtgttggccccgccc
gaggaggcgtcggtccagttcggttcggacgccgccggcatggtcaaacgccagatcctc
aagcgcccggtcgtcgagcgcgacatcgtccccgtcatgtcctcgacgaaccatcccttc
atgcgctcgcccggccaggccattccgctgatcgccgtcgagaccgagcccgagggcgtc
tgtctgatcaccgaggacacggacgtcgaactgcgcgaagagcccatttccggcttcgag
aaggctggttcagggatcacctacgaggacatcggcggcctccaaaacgagatccagcgg
gtgcgcgagatggtcgagctgccgatgaaacacccccagatcttcaagaagctggggatc
gagccgccccaaggcgtcctgctgcacggtccgcccggcaccggcaagaccctgctcgcg
aaggcggtcgcaaacgagacgtcggcgagcttcttctcgatcgcgggtcccgaaatcatc
tcgaagtactacggggagagtgaacagcaactgagagagatcttcgaggacgcaagcgag
gagtccccggcgatcatcttcatcgacgagctcgactcgatcgcgcccaaacgcgaggac
gtcaccggcgaggtcgaacgccgcgtggtcgcccagctgctgacgatgatggacggcctc
gaaagtcgggggcaggtcattgtcatcgccgcgaccaaccgcgtcgatagcgtcgacccc
gcgctgcgtcggccgggtcggttcgatcgggagatctcgatcgacgtccccgacgaggtc
ggacgcgaggagatcctccagatccacactcggggaatgcccctttccgacgacgtgagc
ctctcggagctcgccgacgacacccacgggttcgtcggggcggacatcgagagtctgacg
aaggaggcggcgatgcgcgcgctgcgtcggtacctccccgagatcaacctcgacgaggag
gaggtcccccccgaactgatcgaccggatgatcgtcaagcgcggggacttccggggcgcg
ctcggcgaggtcgagccaagcgccatgcgcgaggtgctcgtcgagctgccgaagatctcc
tggaacgacgtcggcgggctcgaagacgccatcggcgacatcaaggagagcgtcgagtgg
cccctgaccaacccggagcgcttcgacaggctgggcatcgacccgccggcgggcgttctc
ctctacggtccgccgggcaccggcaagacgctgatggcgaaagccgtcgccaacgagacg
aacgcgaacttcatctcgatccgcgggccccaactactcagcaagtgggtcggcgagagc
gagaaggcgatccgccagaccttccgcaaggcacggcaggtcagtcccacagtgatcttc
ttcgacgaactcgacagcctcgcgcccgcacggggcggggaagtcggctcgaacgtctcc
gaacgcgtcgtcaaccagctcctgacggagctcgacgggctcgaggagatggagaacgtc
atggtgatcgccgcgaccaaccgcccggacatgatcgacccggcgctcatccgctcgggg
cggttcgaccgactcgtgatggtcggccagcccggcgaggaaggccgcaaggagatcctc
gagatccacacccaggacatcccgctcgcagccgacgtcagcctccgggagctcgcggag
atcaccgacgggttcgtcggcagcgatctggcgagcatcgcccgcgaggccgcgatgacc
gcgctgcgagaggacagggacgccgacgtcgtcgagatgcgccacttccggggggcgatg
gagtcggtccggccgacgatcaccgacgacatcctcgggtactacgagcagatcaaagac
gagttcgcgggcggcaccgcagagcccggccggaacagacagggcagtcggatcggcttc
cagtag
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integrated database retrieval system
