KEGG   Halalkalicoccus jeotgali: HacjB3_07335
Entry
HacjB3_07335      CDS       T01271                                 
Name
(GenBank) hypothetical protein
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
hje  Halalkalicoccus jeotgali
Brite
KEGG Orthology (KO) [BR:hje00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hje03016]
    HacjB3_07335
Enzymes [BR:hje01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     HacjB3_07335
Transfer RNA biogenesis [BR:hje03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    HacjB3_07335
 Prokaryotic type
   tRNA splicing ligases
    HacjB3_07335
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: ADJ14852
UniProt: D8J295
LinkDB
Position
complement(1367903..1369363)
AA seq 486 aa
MTTFDADGITLEKVREYVWEIPREDGMRVPARVLASEALLEQISDDKTLQQLKNTAHLPG
ISEHALCMPDGHQGYGFPVGGVAGLDAEEGCISPGGVGYDINCGVRMVRTNLTYDDVAGR
EEELVDALFANVPSGLGGGGVVESGIDTVEAILDRGMEWALEEGYAVPADLDHCEDEGVR
EDSDPAAVSQKAKDRGKNQIGSLGSGNHFLEVQRVTDVFREDVAEAYGLAEDRIVVLIHC
GSRGLGHQVCTDYLRKIEKRHGDLLAELPDKELAAAPAGSELAEEYYGAMCAAINFAWVN
RQLITHRTRAVFERVFGRDHEEMGMELLYDVAHNIAKKEVHEVDGEERELYVHRKGATRA
FPAGHPEVPAAYREVGQPVIIPGSMGAGSYVLRGGSESMAETFGSTAHGAGRVMSRTQAK
NEFWGEDVRDDLQDQDRIYVKAQSGATVAEEAPGVYKDVDEVVRVSDALGIGDRVARTFP
VCNIKG
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgaccacgttcgacgccgacgggatcacgctcgagaaggtgcgtgagtacgtctgggag
atcccccgagaggacgggatgcgcgtgcccgcccgcgtcctcgcgagcgaggcgctctta
gagcagatcagcgacgacaagaccctccagcagctgaaaaacaccgcccacctgccgggg
atcagcgagcacgcgctgtgtatgcccgacggccatcagggatacgggtttccggtcggc
ggcgtcgccgggctcgacgccgaggagggctgtatctcgccgggcggcgtgggatacgac
atcaactgcggcgtgcggatggtgcggacgaacctcacctacgatgacgtggcgggccgc
gaggaggaactcgtcgacgccctctttgcgaacgttccctcggggttaggcgggggcggc
gtcgtggaaagcgggatcgacaccgtcgaggcgatcctcgaccggggcatggagtgggcc
ctcgaagaggggtatgccgtgcccgctgatctcgatcactgcgaggacgagggcgtacga
gaggacagcgatccggcagcggtgagccagaaagcaaaggacagagggaagaaccagatc
ggctcgctcggctcgggaaaccacttcctcgaggtccagcgcgtcaccgacgtgttccgc
gaggacgtcgccgaggcctacggactagctgaggaccggatcgtcgtcctgatccactgt
gggtcgcggggactcggccaccaagtctgtacggactacctccggaagatcgagaaacgc
cacggcgacctgctcgcggagctccccgataaggagcttgcggccgcgcccgccggttcc
gaactggccgaggagtactacggcgcgatgtgtgcggcgatcaacttcgcgtgggtaaac
cgccagctgatcacccacagaacgagggcggtcttcgagcgggtgttcggacgggaccac
gaggagatgggcatggaactgctctacgacgtcgcccacaacatcgcgaaaaaggaggtc
cacgaggtggacggcgaggagcgcgaactgtacgtccaccgcaagggcgcgacccgggcg
ttcccggcgggccaccccgaggtgcccgccgcctaccgcgaggtcggccagccggtcatc
atccccgggagcatgggcgcgggcagctacgtgctgcgggggggcagcgagtcgatggcg
gaaacgttcggctcgacggcccacggcgcgggccgggtgatgagccggacgcaggcgaaa
aacgagttctggggcgaggacgtacgcgacgacctgcaggaccaggaccgcatctacgtc
aaagcccagagcggcgcgaccgtcgccgaggaggccccgggcgtttacaaggacgtcgac
gaggtggttcgcgtttcggacgcactggggatcggcgaccgggtcgcgcgcacgtttccg
gtctgtaacatcaagggttag

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