Halalkalicoccus jeotgali: HacjB3_07375
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Entry
HacjB3_07375 CDS
T01271
Name
(GenBank) AAA family ATPase, CDC48 subfamily protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hje
Halalkalicoccus jeotgali
Pathway
hje04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hje00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
HacjB3_07375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hje03019
]
HacjB3_07375
03009 Ribosome biogenesis [BR:
hje03009
]
HacjB3_07375
04131 Membrane trafficking [BR:
hje04131
]
HacjB3_07375
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hje04147
]
HacjB3_07375
Messenger RNA biogenesis [BR:
hje03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
HacjB3_07375
Ribosome biogenesis [BR:
hje03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
HacjB3_07375
Membrane trafficking [BR:
hje04131
]
SNARE
SNARE associated proteins
Others
HacjB3_07375
Autophagy
Aggrephagy
Other aggrephagy associated proteins
HacjB3_07375
Exosome [BR:
hje04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HacjB3_07375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
CDC48_2
RuvB_N
AAA_2
AAA_22
AAA_5
AAA_14
TIP49
NPHP3_N
nSTAND3
AAA_33
RNA_helicase
AAA_28
AAA_7
IstB_IS21
AAA_3
AAA_25
Mg_chelatase
DUF815
ABC_tran
AAA_24
AAA_lid_PRS2_C
AAA_18
TsaE
AAA_30
Sigma54_activat
Parvo_NS1
AAA_17
ATPase
NB-ARC
NACHT
AAA_11
AAA_19
SLFN-g3_helicase
PhoH
bpMoxR
ATPase_2
Bac_DnaA
ResIII
KAP_NTPase
ATP-synt_ab
HJURP_C
Zot
Motif
Other DBs
NCBI-ProteinID:
ADJ14860
UniProt:
D8J2A3
LinkDB
All DBs
Position
complement(1376170..1378443)
Genome browser
AA seq
757 aa
AA seq
DB search
MSAKLTIKPLKQKDAGRGLAAIDRASMRELDLENGDYILIAGGGGEKAVARVWPGYPEDD
GRGVIRIDGRLRQEANVGIDDRATVEKAEVNPATEITIATPQNLRIQGNIGPLVRDRLSG
QAITQGQTVRVGFGIGPMSGGGREIPLKIADTTPSGTVVVTDGTEITISEKPAEQIHEGI
AGGGQGGSPNITYEDIGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTG
KTLMAKAVANEIDASFHTISGPEIMSKYYGESEEQLREMFEEAEENAPAIVFIDELDSIA
PKRGETSGDVERRVVAQLLSLMDGLEERGQVIVIGATNRVDAIDPALRRGGRFDREIEIG
VPDKEGRREILQVHTRGMPLAEGIDLERYAENTHGFVGADIATLAREAAMNALRRIRPEL
DLESEEIDADVLDALRVTEADFKSARKGIEPSALREVFVEVPDTSWEQVGGLEDTKERLR
ETIQWPLEYPEVFESMDLDAAKGVLLYGPPGTGKTLLAKAVANEAESNFISIKGPELLNK
FVGESEKGVREVFSKARENAPTVIFFDEIDSVAGERGRHSGDSGVGERMVSQLLTELDGL
EELEDVVVIATTNRPDLIDSALLRPGRLDRHVHVPVPDEAARKAIFTVHTREKPLADDVD
LDELAEETEGYVGADIEAVCREASMAATREFINSVGPEEAADSVGNVRVSREHFEQALEE
VNPSVTPETRERYAEIEERFDRGSAELEEDNVSRTFQ
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgaaactcacgatcaaaccgttgaaacagaaggacgcggggcgcggactcgcg
gccatcgaccgcgcgtcgatgcgggaactggacctcgagaacggggactacatcctcatc
gcgggcggcgggggcgagaaggccgttgcgcgcgtctggccgggctatccagaagacgac
ggccggggtgtgatccgtatcgatggccggctccgacaggaggcaaacgtcggcatcgac
gaccgcgcgaccgtcgagaaggccgaggtcaaccccgcaaccgagatcaccatcgcgacg
ccccagaacctccgtattcagggtaacatcggcccgctggttcgtgatcgcctgagtgga
caggcgatcacgcagggccagactgttcgcgtgggcttcgggatcgggccgatgtccggc
ggtggtcgggagatcccactgaagatcgccgacaccaccccgtcggggacggtcgtcgtc
accgacggcacggagatcacgatcagcgaaaaacccgccgagcagatccacgaggggatc
gccggaggcggtcagggcggttcgccgaacatcacctacgaggacatcggcggactggac
cgcgagctcgaacaagtacgggaaatgatcgagctgccgatgcgccaccccgagctgttc
cagcaactgggtatcgagccgcccaagggcgtgttgctgcacggcccgcccggcaccggt
aagacactgatggcgaaagccgtcgccaacgagatcgacgcgagcttccacaccatctcc
ggcccggagatcatgtcgaagtactacggcgagagcgaggagcaactgcgcgagatgttc
gaggaagcggaggagaacgctcccgcgatcgttttcatcgacgagctcgactccatcgcg
ccaaagcgcggcgagaccagcggcgacgtcgagcggcgcgtcgtggctcaactgttgagt
ctgatggacgggctcgaagagcgcgggcaggtcatcgtcatcggcgctaccaacagggtc
gacgccatcgaccccgcactgcgccgcggcgggcgcttcgaccgcgagatcgagatcggc
gtccccgacaaggaaggacgccgcgagatcctgcaggtccacacccgggggatgccgctt
gcggaggggatcgacctcgagcgctacgccgagaacacccacgggttcgtcggcgcggat
atcgcgaccctggcccgcgaggcagcgatgaacgcgctgcgacggatccgccccgaactc
gacctcgagagcgaggagatcgacgccgacgtgctcgacgcgcttcgcgtgaccgaggcg
gacttcaaaagcgctcgcaagggaatcgaaccctccgcactgcgtgaggtgttcgtcgag
gtgcccgacacgtcctgggagcaggtcggcgggctcgaggacaccaaagagcgcctgcgc
gagacgatccagtggccactggagtaccccgaggtcttcgagtcgatggacctggacgcc
gcgaagggcgtcctgctctacggtccgccgggcacgggcaagacgctgctcgcgaaggcc
gtcgcaaacgaggccgagtcgaacttcatctcgatcaagggccccgagctgctcaacaag
ttcgtcggcgagagcgagaagggggtccgcgaggtgttcagcaaggcccgcgagaacgcc
ccgaccgtgatcttcttcgacgagatcgactcggtcgcgggcgagcggggccgtcactcg
ggcgactccggcgtcggcgagcggatggtctcgcaactgctgaccgaactcgacgggctc
gaggaactggaggacgtcgtcgtgatcgcgacgacgaaccgcccggacctgatcgactcg
gcactgcttcgccccggtcgactcgaccgtcacgtccacgtgccggtgcccgacgaggcg
gctcgaaaagcgatcttcacggtccacacccgcgagaaacccctcgcggacgacgtggac
ctcgacgagctggccgaggaaaccgagggctacgtcggcgcggacatcgaggcggtctgc
cgggaggcctcgatggcagccacgcgggagttcatcaacagtgtcggccccgaggaggcc
gccgacagcgtcggcaacgtccgggtgagccgcgagcacttcgagcaggccttagaggag
gtcaacccgagcgtcacccccgagacccgcgagcgctacgccgagatcgaagagcgcttc
gaccgtggcagcgccgaactcgaggaggacaacgtcagccggaccttccagtaa
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