Halalkalicoccus jeotgali: HacjB3_08700
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Entry
HacjB3_08700 CDS
T01271
Name
(GenBank) predicted hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
hje
Halalkalicoccus jeotgali
Pathway
hje03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hje00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HacjB3_08700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hje03019
]
HacjB3_08700
Messenger RNA biogenesis [BR:
hje03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HacjB3_08700
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Ortholog
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GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B_2
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ADJ15123
UniProt:
D8J316
LinkDB
All DBs
Position
complement(1606829..1608175)
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AA seq
448 aa
AA seq
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MEIEIATIGGYEEVGRQMTAVRAGDDVVIFDMGLNLSKVLIHDNVQTEKMHSLDLIDMGA
IPDDRVMSDIEGDVQAIVPTHGHLDHIGALSKLAHRYDAPIVATPFTIELVKQEINDENK
FVVENDLQKMEGGETMEIGNGLELEFVHVTHSIIDAINPVLHTPEGAIVYGLDKRMDHTP
VIEDPIDMKRFREIGREGEGVLAYIEDCTNANKKGRTPSESVARRHLQDVMTSIEDYDGG
IVATTFSSHISRVSSLVEFAQDIGRTPLLLGRSMEKYSGTAERLGFVDFPDEVGMFGHRK
SVDRTFKRIMNEGKENFLPIVTGHQGEPRAMLTRMGRGETPYQLDDGDKVIFSARVIPEP
TNEGQRYQSENLLRMQGARIYDEIHVSGHLCQEGHYTMLDALQPKHVIPAHQNMKGYSGY
VDLCQNQGYELGRDIHVTHNGNVISLVE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgaaatcgcaacaatcggcggctacgaggaagtcggacggcagatgaccgcc
gtccgcgcaggcgacgacgtcgtcatcttcgacatggggctcaacctgtcgaaggtcctc
attcacgacaacgtacagaccgaaaagatgcacagcctcgacctgatcgacatgggcgcg
attcccgacgaccgcgtcatgtccgacatcgagggcgacgtccaggcgatcgtcccgacc
cacggtcacctcgaccacatcggggcgctcagcaagctcgcccaccgctacgacgcgccc
atcgtcgcgacgccctttaccatcgagctcgtcaaacaggagatcaacgacgagaacaag
ttcgtcgtcgagaacgacctccagaagatggaaggcggcgagacgatggagatcggcaac
gggctcgaactcgagttcgtccacgtcacccactcgattatcgacgcgatcaaccccgtg
ctccacacgccggagggcgcgatcgtctacgggctggacaagcgcatggaccacacgccc
gttatcgaggaccccatcgacatgaagcgtttccgcgagatcggtcgcgagggagagggt
gtgctcgcatacatcgaggactgcaccaacgcgaacaagaagggccggaccccgagcgag
tcggtcgcacggcgccacctccaggacgtcatgacgagtatcgaggactacgacggcggg
atcgtcgccacgacgttctccagtcatatctcccgtgtctcctcgctcgtcgagttcgcc
caagacatcggtcgtacgcccctgctcttgggccgctcgatggagaagtactcgggcacc
gcagaacggctcgggttcgtcgacttccccgacgaagtggggatgttcggccaccggaag
tcagtcgaccggaccttcaagcgcatcatgaacgagggcaaggagaacttcctgccgatc
gtgacgggccaccaaggcgagccccgtgcgatgctcactcgaatgggccgcggcgagacg
ccctaccagctcgacgacggtgataaggtcatcttctcggcacgggtcattccggagccg
accaacgagggccagcgctaccagtccgagaacctgctgcggatgcagggtgcgcgcatc
tacgacgagatccacgtctcgggccacctctgtcaagagggccactacacgatgctcgac
gcactccagcccaaacacgtcatcccggcccaccagaacatgaagggctactcgggctat
gtcgacctctgtcagaaccagggctacgaactgggccgtgacatccacgtcacgcacaac
gggaacgtcatctcgctggtcgagtaa
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