Halalkalicoccus jeotgali: HacjB3_12900
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Entry
HacjB3_12900 CDS
T01271
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hje
Halalkalicoccus jeotgali
Brite
KEGG Orthology (KO) [BR:
hje00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hje03016
]
HacjB3_12900 (truD)
Enzymes [BR:
hje01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HacjB3_12900 (truD)
Transfer RNA biogenesis [BR:
hje03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HacjB3_12900 (truD)
Prokaryotic type
HacjB3_12900 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ADJ15961
UniProt:
D8J708
LinkDB
All DBs
Position
complement(2382962..2384344)
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AA seq
460 aa
AA seq
DB search
MNEHLPAHPIEREVGMEFYASGSDGIGGRIRDRDGDFRVREIEDFPTEPVNADPAAYPHL
VLRVTLRGWDTNDFARRLSDAMGASRERVSWAGTKDKRAVTTQLFSVMKGEPEALPEVRG
ADIEVVGRAGRDLQFGDLAGNEFRIRVRDADPENCDAITAALREFGGGRVGVPNYFGQQR
FGSRRPVTHRVGLAIAREDWRGAVMEYLGNPRESEPEDTQAARGYVDREARRASKEGEEG
SDPLDETEDWDGALERFPRKLGFERAMLHRLVEGGAESEADFRAALETAPTNLQRLFVNA
AQSSLFNRILSERLERDLPFDRAVAGDVVCFADTDAPEGLARPDTSRTQRVTENRVETVN
RHVERGRAFVTAPLVGTETELGEGEPGAIEREVLAEAGVTTTDFDLPGEFHSTGTRRAIL
LTTDLSVKRDPLTFDFALPSGSYATVLLREYLKCDPRDLG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcacctccctgcccacccgatcgagcgcgaggtcggcatggagttctacgcc
agcgggtcggacggcatcggcgggcggatccgcgatcgcgacggggacttccgggtccgg
gagatcgaggactttccgaccgagcccgtcaacgccgaccccgctgcctacccgcatctc
gtgctccgggtcaccctccgaggttgggataccaacgacttcgcccgtcgcctgtcggat
gcgatgggggccagccgagagcgcgtctcgtgggccgggacgaaggacaaacgcgccgtg
accacgcaactattcagcgtgatgaagggcgagcccgaggcactccccgaggtccgcggc
gccgacatcgaggtcgtcggccgcgccggtcgggacctgcagttcggcgacttagcgggc
aacgagtttcgcatccgggttcgggacgccgaccccgagaactgcgacgcgatcacggcg
gcgcttcgggagttcggcgggggacgagtgggagttccgaactacttcggccagcagcgt
ttcggtagtcgccggcccgttacccaccgggtcgggctcgcgatcgcccgtgaggactgg
cgcggggcggtcatggagtacctcggcaatccccgcgagtccgagccggaagacacgcag
gcggccagaggatacgtcgaccgcgaggcgcgacgcgcctcgaaggagggcgaggaagga
agcgacccgctcgacgagacggaagactgggacggcgcgctcgaacggtttccccgcaaa
ctcggcttcgaacgcgctatgctccaccggctggtcgaaggcggtgcggaaagcgaggcg
gacttccgcgctgcgctcgaaaccgcgccgacgaacctccagcggctcttcgtcaacgcc
gctcaatcctccctgttcaaccggatcctgagcgagcgcctcgaacgcgatctaccgttc
gaccgtgcggtcgcaggtgacgtcgtctgttttgcggataccgacgcccccgaggggctt
gcccggccggataccagccgaacccagcgcgtgaccgaaaaccgtgtcgagacggtcaat
cgccacgtcgagcggggtcgggcgttcgtcaccgcgccgctcgtgggcaccgagaccgaa
ctcggcgagggcgaacccggcgcgatcgaacgcgaggtactcgccgaagccggagtcact
actactgacttcgacctacccggcgagttccactcgaccggcacccggcgagcgatcctg
ctgacgaccgacctctcggtcaagcgcgacccgctcacgttcgactttgcgctcccgagc
ggctcgtatgctaccgttctgctccgcgaatacctgaagtgcgacccgcgagatctgggc
tga
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