Halalkalicoccus jeotgali: HacjB3_13035
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Entry
HacjB3_13035 CDS
T01271
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hje
Halalkalicoccus jeotgali
Brite
KEGG Orthology (KO) [BR:
hje00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hje03032
]
HacjB3_13035
03400 DNA repair and recombination proteins [BR:
hje03400
]
HacjB3_13035
Enzymes [BR:
hje01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HacjB3_13035
DNA replication proteins [BR:
hje03032
]
Prokaryotic type
DNA Topoisomerases
HacjB3_13035
DNA repair and recombination proteins [BR:
hje03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HacjB3_13035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
DNA_pol_lambd_f
HHH
DUF4332
Cdd1
IMS_HHH_1
HEXIM
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ADJ15988
UniProt:
D8J735
LinkDB
All DBs
Position
complement(2406699..2409260)
Genome browser
AA seq
853 aa
AA seq
DB search
MDLIITEKDNAARRIAAILSGESAEVERQNGVNVYRWGGKRCIGLSGHVVAVDFPSEYSD
WRDVEPVELIGAAVEKTPTQENIVRTVRLLARDANRVTIATDYDREGELIGKEAYEIVRD
VNDGAEIDRVRFSSITDGEVHSAFDDPDEIDFDLAAAGEARQIIDLVWGAALTRFLSLSA
RQLGDDFISVGRVQTPTLKLIVDREREIEAFDPEAYWEIFANLVKGEESFDAQYFYRDED
GNEAERVWDGQRAEAVYETLREASEARVESVSRRTRTDAPPAPFNTTQFIRAASSIGYSA
KRAMSIAEDLYTAGYITYPRTDNTVYPEDLDPRELLDAFTGNRTFGEDAETLLEREEITP
TEGDEETTDHPPIHPTEELPTKGELSDAEWEVYELVVRRFFATVADSARWEHLKVVLEVG
EHRLKANGKRLVEPGYHAVYPYFSTNENVVPDVEEGESLALTEIRIEDKETQPPRRYGQS
RLIETMEEMGIGTKSTRHNTIEKLYDRGYIENDSPRPTKLATAVVEAGEEYADRVVSEAM
TAQLEDDMQAIAAGEKDLDEVAGESREMLERVFDDLMESREEIGDHLQKSLKADKTLGPC
PESGHDLLVRRSRRGSYFVGCDGYPDCEYTLPLPNTGKPLILEATCEEHDLRHVKMLAGR
GTFVHGCPQCKADEADEEEDRVIGACPECGEGSIPPSSRDGEDPAATAEDGQPVEADGGE
LAIKQLRNGSRLVGCTRYPDCDYSLPLPRRGDIEITDERCEEHGLPELLVHSGDEPWELG
CPICNYREYQERENDSGTDLESIEGVGAKTAEKLAAAGVESVSDLQDAEAETVANEVEGI
SADRVRKWQAKAG
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
gtggatctgatcatcaccgagaaggacaacgccgcccgccggatcgccgccatcctcagt
ggcgagtccgcggaggtcgaacgccaaaacggcgtcaacgtctatcgctggggcgggaaa
cgctgtatcggcctgtcgggccacgtcgtcgccgtcgacttcccctcggagtactcggac
tggcgtgacgtcgagcccgtcgaactgatcggcgcggccgtcgagaagacccccacacag
gagaacatcgtccgcaccgttcgcctgctggctcgggacgcaaaccgggtaacgatcgcg
accgactacgaccgcgagggcgaactcatcgggaaggaggcctacgagatcgtccgcgac
gtcaacgacggggcggagatcgaccgggtgcgcttttcgtcgatcaccgacggtgaggta
cacagcgccttcgacgaccccgacgagatcgacttcgacctggcggcggcgggcgaggcc
cgccagatcatcgatctggtctggggggcggccctcaccaggttcctctcgctttcggcc
cggcaactgggcgacgacttcatttcagtaggaagggtccagacgcccaccctcaagctg
atcgtggatcgcgaacgcgagatcgaggcgttcgaccccgaggcctactgggagatcttc
gcgaacctcgtgaaaggggaggagagcttcgacgcccagtacttctaccgcgatgaggac
ggcaacgaggccgaacgcgtctgggacgggcagcgtgcggaggctgtctacgagaccctt
cgggaagcgagcgaggcccgcgtcgagtcggtctcgcggcgaacgcgaaccgacgcgccg
cccgcaccgttcaacaccacccagttcatccgtgcggcgagttcgatcggttattccgcc
aaacgcgcgatgagcatcgccgaggacctctatacggcgggctacatcacctatccccgg
accgacaacacggtgtatcccgaggacctcgatccccgcgagctactcgatgcgttcacc
gggaaccggaccttcggcgaggacgcagaaaccctgctcgaacgcgaggaaattaccccc
acggagggtgacgaggagacgaccgaccaccccccgatccatcccacggaggaactgccg
acgaagggcgaactgtcggatgcggagtgggaggtctacgaactggtcgtccggcgcttt
ttcgcgaccgtcgccgattcggcgcgctgggagcacctcaaggtcgtcctcgaagtgggc
gagcaccgcctgaaggcgaacggcaaacgcctcgtcgaaccgggttaccacgccgtctac
ccctatttcagcacgaacgagaacgtcgtccccgacgtcgaggagggcgagtccctcgcg
ttgaccgagatacgaatcgaggacaaggaaacccagccgccccgtcgatacgggcagtcg
cgcctcatcgagacgatggaggagatgggaatcggaacgaaaagtacgcgtcacaacacg
atcgagaagctctacgaccgggggtacatcgagaacgactcgccgcggcccaccaagctg
gcgacggcggtcgtcgaggccggcgaggagtacgcagaccgcgtggtaagcgaggcgatg
accgcccagttggaagacgacatgcaggcgatcgccgcgggcgagaaggacctggacgaa
gtggccggcgagtcccgcgagatgctcgaacgggtgttcgacgacctgatggaatcgcgc
gaggagatcggcgaccacctccagaaatcgctcaaagcggataagaccctgggaccgtgc
cccgaatcgggtcacgatcttttggttcggcggtcccgccgcgggtcgtacttcgtgggc
tgtgacggctatccggactgcgagtacacgcttccgctgcccaatacgggcaagccgctc
atcctcgaggcgacctgcgaggagcacgacctacggcacgtgaagatgctcgccggccga
gggacgttcgtccacggctgtccgcagtgtaaggctgacgaggccgacgaggaggaggat
cgagtgatcggggcctgtcccgaatgtggggaggggtcgatcccgccctcctcgcgtgac
ggcgaggaccccgccgcaaccgccgaggacggccaacccgtcgaggccgacggcggcgag
ctcgcgatcaaacagctccggaacggctcgcggctcgtgggctgtactcggtaccccgac
tgtgactactcgctgccgcttccgcgacgcggcgacatcgagatcaccgacgagcgctgt
gaggaacacggcctgcccgagctgctcgtccactcgggcgacgaaccctgggaactgggc
tgtccgatctgtaactaccgggagtaccaggagcgagagaacgactcggggaccgacctc
gaatcgatcgagggcgtcggcgcgaaaacggccgagaagctcgccgccgcgggtgtcgag
agcgtcagcgacctccaggacgccgaggccgagaccgtcgcaaacgaggtcgagggtatc
agcgccgatcgggttcgcaagtggcaggcgaaagcgggctga
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