Halalkalicoccus jeotgali: HacjB3_13505
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Entry
HacjB3_13505 CDS
T01271
Name
(GenBank) repair helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hje
Halalkalicoccus jeotgali
Pathway
hje03420
Nucleotide excision repair
hje03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hje00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HacjB3_13505
03430 Mismatch repair
HacjB3_13505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hje03400
]
HacjB3_13505
Enzymes [BR:
hje01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HacjB3_13505
DNA repair and recombination proteins [BR:
hje03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HacjB3_13505
MMR (mismatch excision repair)
Other MMR factors
HacjB3_13505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
AAA_22
AAA_11
DEAD
Herpes_ori_bp
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ADJ16082
UniProt:
D8J7R2
LinkDB
All DBs
Position
2488080..2489918
Genome browser
AA seq
612 aa
AA seq
DB search
MAETQVTRLFGGPGSGKTTALLDRVEGLLERDEVAVNDVLVVSYTRAAAAEIRERLAERL
DISPRSLQGNVCTMHAKAYELLDLSRADVVGEKQKKAFCEDYGLEFEDEYSGAGRRTARS
TTLGNKIIATSQWLQRTNREVGDWYDVPFQWNDEEVRLPPEIDENSLSGNKYTPTWPSDD
DRIDIPEAIRAWRAFKGEEGLVGFADMLERVEQRSLVPNVDFLVIDEFQDITTLQYAVYE
EWKPHMEGVLIAGDDDQVVYAWQGADPNLLLDAEVDDDNVLPNSYRLPSRILDVVNREVR
HIEKRQEKDLNPRKEGGKVEAVESPSMLDLVRNVRATVAETPDETVMVLFRARYQMFQFL
DEFISEGMPFRVLTDQRMWTDRLQQFIAAVEKIDAGEEINGLEARRLADMLADSAFSTND
RDDLFDEIDERKEAAGVDNVAEITIGPETIREYAPFVPDPVSAADMSRKITSFQRKSVKS
YFATGTYEGADPERVRVGTIHSAKGREADHVFVATDLTEKVVEQMAATIEQEAVPIEEEF
TRTTSPVPMLTDNERRVFYVGMSRARERLVLMENLVNGAPTLPLDVLLCNEPREEPIEEL
IAEANAPEAEVH
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggctgagacacaggtcacccgactgttcggtggacccggcagcgggaagacgaccgcc
ctactcgaccgcgtcgaggggctccttgaacgcgacgaggtcgccgtcaacgacgtattg
gtcgtctcctatacgcgggccgccgccgccgagatccgcgaacgactggccgaacgcctc
gacatctccccacggagcctgcagggcaacgtctgtacgatgcacgcgaaggcctacgaa
ctgctcgacctctcgcgtgcggacgtcgtcggcgagaaacagaaaaaggcgttctgtgag
gactacggcctggagttcgaagacgagtacagcggcgccggccgccggaccgcgcgctca
acgacgctcggcaacaagatcatcgcgacgagccagtggctccagcgcaccaacagggaa
gtcggcgactggtacgacgtgcccttccagtggaacgacgaggaggtccgtctgcccccc
gagatcgacgagaactcgctgtcgggcaacaagtacactccgacgtggccctcggatgac
gaccggatcgacatccccgaggcgatccgggcgtggcgcgcgttcaagggcgaggagggg
ctggtcggcttcgccgatatgctcgaacgggtcgaacagcgctcgctggttccgaacgtc
gacttcctggtcatcgacgagttccaggacatcaccacgctgcagtacgccgtctacgag
gagtggaaaccccacatggagggtgtgttgatcgccggcgacgacgaccaggtcgtctac
gcctggcagggtgcggacccgaacctcctcttggacgccgaggtcgacgacgacaacgtc
ctaccgaactcctatcggctcccctcgcggatcctcgacgtcgtcaaccgcgaggtccga
cacatcgaaaagcgccaggagaaggacctgaacccccgcaaggagggcggcaaggtcgag
gccgtcgagagcccctcgatgctcgatctggtgcgaaacgtgcgcgcaacggtcgccgaa
acccccgacgagacggtgatggtgctctttcgggcgcgctatcagatgttccagttcctc
gatgagttcatctccgaggggatgcccttccgggtgctgaccgaccagcggatgtggacc
gaccgcctccagcagttcatcgccgccgtcgagaagatcgacgcgggcgaggagatcaac
gggttggaggcccggcgcctcgcggacatgctcgccgattccgcgttcagcacgaacgac
cgggacgacctcttcgacgagatcgacgagcgaaaggaggccgcgggcgtcgacaacgtc
gcggagatcacgatcgggcccgagaccatccgcgagtacgcgcccttcgtccccgacccg
gtctcggccgcggacatgtcccggaagatcaccagtttccagcgaaagagcgtcaagtct
tacttcgcgacggggacctacgagggtgcggacccagagcgcgtgcgcgtcgggacgatc
cactccgcgaagggccgcgaggccgaccacgtcttcgtcgcgaccgatctcactgaaaag
gtcgtcgaacagatggccgcgacgatcgaacaggaagcggtgcccatcgaggaggagttt
acccggacgaccagcccggtgccgatgctgaccgacaacgaacggcgcgtgttctacgtc
gggatgagccgcgcacgggagcgactcgtcctgatggagaacctcgtcaacggcgcgccg
acgctgccactcgacgtgttgctctgtaacgaaccccgcgaggagcccatcgaggagctg
atcgccgaggccaacgcccccgaggccgaagtccactag
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