Halalkalicoccus jeotgali: HacjB3_14120
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Entry
HacjB3_14120 CDS
T01271
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
hje
Halalkalicoccus jeotgali
Pathway
hje03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hje00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HacjB3_14120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hje03021
]
HacjB3_14120
Transcription machinery [BR:
hje03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HacjB3_14120
Prokaryotic type
Archaeal type
TFB
HacjB3_14120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
A2L_zn_ribbon
Zn_ribbon_IS1595
Zn_Ribbon_YjdM
Cyclin_C
DUF7558
Zn_ribbon_LysW
Zn_ribbon_tTFIIB
Ham1p_like
Sigma70_r4
Trm112p
Cyclin_N
Zn_ribbon_RRN7
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-ProteinID:
ADJ16205
UniProt:
D8J8F9
LinkDB
All DBs
Position
complement(2600825..2601796)
Genome browser
AA seq
323 aa
AA seq
DB search
MTRSTRQREREHETERSEGTQEEEGTRTCPECASDNLVKSSDRGELICDDCGLVVEEGNI
DPGPEWRAFNHQERQSKSRVGAPTTQTMHDKGLTTTIDWKDKDAYGRSISSKKRSQMHRL
RKWQERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALKEDLIRGRSIE
GVATAALYAACRKEGIPRSLEEISEVSRVERKEIGRTYRYISQELGLEMRPVDPKKYVPR
FCSELELSEEVQSKANEIIETTAEEGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADV
AQVTEVTIRNRYQEQIEAMGIHS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgacacggtccacccgccagcgggagcgcgaacacgagacggagcgatccgagggaact
caggaggaagaagggacacgcacctgtccggagtgtgcctcagacaacctcgtcaagagc
tctgatcggggcgaactcatctgcgatgactgtggtctggtcgtcgaggagggcaacatc
gatcccgggccggagtggcgggcgttcaatcaccaggaacgccagagcaagtccagggtg
ggcgcgccgacgacccagacgatgcacgataaggggttgacgaccaccatcgactggaag
gacaaggacgcctacggacgctcgatctcctcgaagaaacgaagccagatgcaccgactg
cgcaaatggcaggaacgcattcgtacgaaggacgccggcgagcgcaacctgcagttcgcg
ctttccgagatcgaccggatggcaagcgcgctcggtgtgcctcgatcggtacgggaggtc
gcgagcgtgatctaccgacgcgccctgaaagaggatctcatccgtggacgctcgatcgag
ggcgtcgccaccgcggcgctctacgccgcctgtcgaaaggagggcattccccgctcgttg
gaggagatcagcgaggtctcgcgggtcgagcgaaaggagatcggccgcacctatcggtat
atctcccaggaactcggcctcgaaatgcgccccgtcgaccctaaaaagtacgttccccgt
ttttgctccgaactcgaactctccgaggaggtacagtcgaaggccaacgagatcatcgaa
accaccgccgaagagggattgctctcgggcaaatcacccaccggctacgccgcggcggcc
atctacgctgcctccctactctgtaacgagaagaaaacccagcgcgaggtcgccgacgtc
gcgcaggtgacggaggtcacgatcaggaaccgctatcaggaacagatcgaagcgatgggc
atccacagctag
DBGET
integrated database retrieval system
