Halalkalicoccus jeotgali: HacjB3_14720
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Entry
HacjB3_14720 CDS
T01271
Name
(GenBank) replication factor A
KO
K07466
replication factor A1
Organism
hje
Halalkalicoccus jeotgali
Pathway
hje03030
DNA replication
hje03420
Nucleotide excision repair
hje03430
Mismatch repair
hje03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hje00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HacjB3_14720
03420 Nucleotide excision repair
HacjB3_14720
03430 Mismatch repair
HacjB3_14720
03440 Homologous recombination
HacjB3_14720
03460 Fanconi anemia pathway
HacjB3_14720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hje03000
]
HacjB3_14720
03032 DNA replication proteins [BR:
hje03032
]
HacjB3_14720
03400 DNA repair and recombination proteins [BR:
hje03400
]
HacjB3_14720
Transcription factors [BR:
hje03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
HacjB3_14720
DNA replication proteins [BR:
hje03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
HacjB3_14720
DNA repair and recombination proteins [BR:
hje03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
HacjB3_14720
MMR (mismatch excision repair)
HacjB3_14720
DSBR (double strand breaks repair)
HR (homologous recombination)
HacjB3_14720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
OB_Ssb-like
OB_MEIOB_N
Motif
Other DBs
NCBI-ProteinID:
ADJ16323
UniProt:
D8J954
LinkDB
All DBs
Position
2716500..2717948
Genome browser
AA seq
482 aa
AA seq
DB search
MGAIEDVYSDLDTDVSLEEFEDAVEAKVEQMGGLADEETAAMLIAHELRDEEVTGISDIE
PGMDEVKFLAKVTGVGELRTFERDEEDEDGMVINVEAADATGSVRLAFWDEQAKAIENEG
MEQGTVLRVKGRPKEGYNGLEVSVTQAEEDPDAEVDVDIRDTYRIEDLSMGLSDVDLKGK
VLATDGVRTFDRDDGSEGRVANLTLGDETGRIRITLWDERTEATEAFSAGESVEIVDGYV
RERNGELELHVGNRGAIEGIEDEIEYVPETTAIEDLAIEDVADIGGVVRSADPKRTFDRD
DGSEGQVRNVRIQDETGDIRVAMWGEKADIEMGPGDTVQFADVEIQDGWQDDIEASAGWR
ATVTVTDSGSSAPTAGGGDSDSAELSSFGDDGSAAGTAESAGSENASGSAESVDSETGPS
AGDGDAETVEFTGTVVQPGDPAKLDDGTETVSVHTSEELSLGEEVTVRGPMREGRIDAED
VV
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgatagaggacgtgtactcggacctcgataccgacgtgtccctcgaggagttc
gaggacgcagtcgaggcgaaagtcgagcagatgggcgggctcgcggacgaggagaccgcc
gcgatgttgatcgcccacgaactgcgcgacgaggaggtgacggggatcagtgacatcgaa
ccggggatggacgaggtgaagttcctcgcgaaggtcaccggcgtcggcgaactccgcacc
ttcgagcgcgacgaggaggacgaggacggcatggtgatcaacgtcgaggccgccgatgcg
accggctcggtcaggctcgccttctgggacgaacaggccaaagccatcgagaacgagggc
atggaacagggcaccgtcctccgggtgaagggccgccccaaggaggggtacaacgggctc
gaagtcagcgtcacccaggcagaagaggaccccgacgccgaggtcgacgtcgatatccgg
gacacctaccggatcgaggacctctcgatggggctctcggacgtcgatctcaagggcaag
gtgctcgcgaccgacggcgtgcggaccttcgaccgggacgacggctccgaagggagagtg
gcgaacctgaccctcggcgacgaaacggggaggatcaggatcaccctctgggacgagcgc
accgaggccacggaggcgttctcggcgggcgagtccgtcgaaatcgtcgacggctacgtc
cgcgagcgaaacggcgagttggagctccacgtcggcaatcgcggggcgatcgaggggata
gaagacgaaatcgagtacgtcccggagacgaccgcgatcgaggacttggcaatcgaggac
gtcgcggatatcggcggtgtggtccgttcggcggacccgaaacgcaccttcgaccgggac
gacggctcggagggccaagtgaggaacgtacggatccaggacgaaaccggcgacatccgg
gtcgcgatgtggggcgagaaagccgacatcgagatgggaccgggcgataccgtccagttc
gccgacgtcgagatccaggacggctggcaggacgacatcgaggcctctgcgggctggcgc
gcgacggtgacggtcaccgattcgggctcctcggccccgacggccggtgggggcgattcg
gactccgcggaactctcgtcgttcggcgacgacgggtcggccgccggcactgcggagtcg
gcaggaagcgagaacgcgtcgggctcggcggaatcggtcgactccgagacgggcccgtcg
gcgggcgacggggacgcagagaccgtcgagttcaccgggacggtcgtccagccgggcgac
cccgcgaagctcgatgacggcacggaaaccgtctcggtacacacgagcgaggaactctcg
ctgggcgaggaggtcacggtccgggggccgatgcgcgagggacggatcgacgccgaggac
gtcgtttag
DBGET
integrated database retrieval system
