Halalkalicoccus jeotgali: HacjB3_18813
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Entry
HacjB3_18813 CDS
T01271
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hje
Halalkalicoccus jeotgali
Pathway
hje03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hje00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HacjB3_18813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hje03021
]
HacjB3_18813
Transcription machinery [BR:
hje03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HacjB3_18813
Prokaryotic type
Archaeal type
TFB
HacjB3_18813
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Cas12f1-like_TNB
Motif
Other DBs
NCBI-ProteinID:
ADJ17102
UniProt:
D8JCJ5
LinkDB
All DBs
Position
p2:complement(305821..306858)
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AA seq
345 aa
AA seq
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MSISLTVLDRRRHNQRRTPEIMTNTVPTIIDDHGKEASSNSLSQSASVCPECDGLVIQDD
EHGETICEDCGLVLDTDVVDHGPDWRAYDSKERDEKSRIGAPTTQLMHDKGLSTMIGWRD
RDAYGHAISEQKRAQLQRLRQWDERFRTKDAHERNLKQAFGEIRRMASALGLPDPIRETA
GVLYRRAVEDDLLPGRSIEGMATASLYTAARQHSTPRTLAELETVSRVKRLRIQRAYRYL
SRELGLRMEPVDPLQYVPQFASELNVSDEATRRARDLLTTAKAQGVHSGRSPAGLAAGAI
YAATRLTNEQVTQETVRAVTHVSRMTIRIRYQELLEVYGAEGHNA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
ttgagtatctctctcacagtattagatcgaagacggcacaaccagcgtcgaactccagaa
atcatgactaacactgtccctacaatcatcgatgaccatggcaaggaggcatcctcgaat
tcactatctcagtcggcctcagtgtgtccagaatgtgatggacttgtcattcaggacgat
gagcatggtgaaaccatctgcgaggactgtggcttggttctcgatactgatgtggtcgat
catggtccggactggcgtgcatacgatagcaaggagcgtgatgaaaaaagtcggattggt
gccccaacaacacaattgatgcatgataaggggttgagtacaatgattggttggcgagat
agggatgcatatgggcacgcgatatcagagcaaaaacgagcacaattacaacgccttcgc
cagtgggacgaacggtttcgaacgaaggatgcacacgaacgaaatctcaagcaggcattc
ggcgagattcgtcggatggcctccgctcttggtttgcctgatcccattcgtgaaactgct
ggtgtgctctatcgacgagctgttgaagacgacttgcttcccggacgatccattgaaggg
atggctacagcatcgttgtatacagcggcccgacaacattcgacaccacggacattggca
gagctcgagactgtaagtcgagttaagcgactccgtatacagcgtgcctatcgatatttg
tcccgtgagcttggcctacgaatggaaccagtggatccacttcaatacgttccacagttt
gcctccgaactcaatgtgagtgatgaagcaacacgtcgggctcgggacctgctcacaacg
gcaaaagcgcagggggttcatagcggtcggagtcctgctgggcttgccgctggtgctatt
tatgcagctactcgattaacaaacgagcaagtcacacaagagactgtacgagctgtaact
cacgtaagtagaatgacgatccgaatccgctatcaagagttgctcgaggtgtatggtgca
gaagggcacaatgcgtga
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