Haematospirillum jordaniae: AY555_00845
Help
Entry
AY555_00845 CDS
T04366
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hjo
Haematospirillum jordaniae
Pathway
hjo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hjo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AY555_00845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hjo03021
]
AY555_00845
03400 DNA repair and recombination proteins [BR:
hjo03400
]
AY555_00845
Enzymes [BR:
hjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AY555_00845
Transcription machinery [BR:
hjo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AY555_00845
DNA repair and recombination proteins [BR:
hjo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AY555_00845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
IDH
Motif
Other DBs
NCBI-ProteinID:
AMW33960
UniProt:
A0A143DBQ6
LinkDB
All DBs
Position
complement(173552..174568)
Genome browser
AA seq
338 aa
AA seq
DB search
MIQKNWQELIKPQKLNVEPGDDPACTATVVAEPLERGFGMTLGNALRRVLMSSLQGAAVT
AIQIEGVLHEFSSVPGVREDVTDIILNIKALALRMQGEGSKRMTLKATGPCVVTAGNIET
GHGVEVLNPDLVICHLDTNASFNMELTVDTGKGYVPAANNRSEDSPIGLIPVDSIFAPVR
RVSYRVENARVGQVTDYDKLVMNVETNGAVTPEDAVALAARILQDQLALFINFDEPQAAS
EAYKEDDLPFNRNLLRKVDELELSVRSFNCLKNDNICYIGDLVQKTEAEMLRTPNFGRKS
LNEIKHLLAHMSLHLGMEVPNWPPENIEELAKKLEDPY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgatccagaaaaactggcaggaactaatcaaaccgcaaaaactcaacgtcgagcccggt
gacgatcccgcgtgcacggcaaccgttgttgcagaaccgcttgagcgcggctttggcatg
accttgggcaatgccctgcgtcgtgttttgatgtcttccctccagggtgcggctgttacc
gcgatccagattgaaggcgtcctccacgagttttcctctgtccccggtgtcagggaagat
gtcacggatatcatcctgaatatcaaggctcttgccttgagaatgcagggtgaaggttcc
aagcgcatgacccttaaggcaacaggtccgtgtgttgtgacagccggaaatattgagact
ggtcacggcgtagaggtgctgaatcccgatttggtgatttgtcatcttgataccaatgcc
tcctttaacatggagttgaccgttgataccggcaagggttacgtgccggctgcaaataat
cgttccgaggattcacctattggcctgatcccggttgattcgatttttgctccggttcgt
cgtgtgtcctatcgcgttgagaatgcgcgtgttggtcaggtgacggactatgacaagttg
gtcatgaacgtagagaccaatggtgctgtgacgccggaagatgctgttgctttggcagcc
cgtattcttcaggatcagcttgctctcttcatcaattttgacgagccgcaggctgcttcc
gaggcgtataaagaagatgatctgccattcaatcgcaatcttctgaggaaggttgacgag
ttggagttgagtgttcgttcgttcaattgcctgaagaacgacaatatttgttacattggt
gatctggttcagaagaccgaggcagagatgcttcgtacgccgaactttggtcgtaagtcc
ttgaatgagatcaagcacctgcttgcgcacatgtccctgcaccttggcatggaagtgccg
aactggccgcctgagaatattgaagaacttgccaagaagcttgaagatccctattga
DBGET
integrated database retrieval system
