Haematospirillum jordaniae: AY555_02475
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Entry
AY555_02475 CDS
T04366
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hjo
Haematospirillum jordaniae
Pathway
hjo03030
DNA replication
hjo03410
Base excision repair
hjo03420
Nucleotide excision repair
hjo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AY555_02475
03410 Base excision repair
AY555_02475
03420 Nucleotide excision repair
AY555_02475
03440 Homologous recombination
AY555_02475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hjo03032
]
AY555_02475
03400 DNA repair and recombination proteins [BR:
hjo03400
]
AY555_02475
Enzymes [BR:
hjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AY555_02475
DNA replication proteins [BR:
hjo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AY555_02475
DNA repair and recombination proteins [BR:
hjo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AY555_02475
NER (nucleotide excision repair)
GGR (global genome repair) factors
AY555_02475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Adenylate_cycl
Motif
Other DBs
NCBI-ProteinID:
AMW35496
UniProt:
A0A143DFS4
LinkDB
All DBs
Position
complement(496038..498794)
Genome browser
AA seq
918 aa
AA seq
DB search
MKHLFLVDGSGYIFRAYHALPPLSRSDGTPTNAVSGYTSMMMKLVEDTDADYVAVIFDAA
RRSFRNDIYADYKAHRPPPPEDLVPQFSLIREATAALGVAHVEMDGFEADDLIATYTLMA
RQQGMRVTIVSSDKDLMQLVGEGVALYDAMKNKTIGPEAVLDKFGVAPEKVVDVQALAGD
ASDNVPGVPGIGIKTAATLITEYGDLDTLLLRAPEIRQPKRRASLIEHADAARISRQLVT
LRQDVPVPVPLESFARRAPDPDVLIPFLETMEFRRLLSMVRARTASSVPYGDADAGVVAA
KAEESVSYELVQDLQALQRWVDRAMQIGIVAVDTETDGLDPMQARLVGMSLAVGPGQACY
IPLRHGMQQQQGDLLAGPGPEKPQQVAIADAVAILQPLFLDRSVLKVGHNIKFDLHVLAR
EALVLTPVDDTMVLSYVLDAASHGHGMDELAERHLGYQTIRYEDVCGKGKAAVTFDQVPL
DKALSYAAEDADITLRLHTLFRDRLTAERMVAVYEMLDRPLIPVLFAMEEEGIAVNRTAL
ESLSSDFAGRMVTLEADIQDLAGEAFNVASPKQLGDILFGRMGLKGGRKSARTGAWSTDA
EVLESLAAEGHALPQKVLDWRALAKLKSTYTDALVRQINPRSGRVHTRFAMTVTTTGRLS
SNDPNLQNIPIRTEEGRKIRQAFVARPGCVLLSADYSQIELRLVAHVASVAALREAFHND
QDIHAMTASRVFGVPVAGMDPMLRRRAKAINFGIIYGISAFGLARQLGISNGEAKAFIDA
YFAMFPEIRDYMEQTIEQARRQGFVRTLFGRKCFTPDIQSKNPAQRAFAERAAVNAPIQG
SAADILKKAMIALPLALEEKGLKARLLLQVHDELVFDVPRDQVDETCSVVRAVMERAAVL
SVPLIVDTGVADTWAGAH
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatctctttttggttgatggatccgggtatatctttcgcgcctatcatgccttg
cctcccctgtcccgcagcgacggtaccccgacaaatgcggtgtctgggtacactagcatg
atgatgaagctggtcgaggacacggatgcggactatgtggcggttatctttgatgccgct
cgccgatctttccggaacgatatttatgccgattacaaggctcatcgtcctcccccaccc
gaggatctggttccccagttttcgctgattcgcgaggcaaccgcggcgctgggcgtggct
catgtggaaatggatggattcgaagccgatgacctgatcgcaacctatacccttatggcc
cgtcagcagggaatgcgggtgacgattgtctcttccgacaaggatctgatgcagctggtc
ggggagggggtcgcgctctacgacgccatgaagaacaagacgatcggtccggaggccgtt
ctcgacaagtttggtgttgcgccggagaaggtcgttgatgtgcaggctttggccggggat
gcttccgacaatgtacccggggtgccggggatcgggatcaagaccgcagccaccttgatt
acggaatacggtgatctggatactttgttgttgcgtgcgcccgagattcgccagcccaag
cggcgggcaagtctgatcgagcatgctgatgctgcccgcatttcgcgtcagctggtgaca
ttgcgtcaggatgtgccagtaccggtgcctcttgagtcgtttgcccggcgtgctccggac
ccggatgttctgattccatttcttgagacgatggagtttcgtcggcttctgtccatggtg
cgtgcccgtacagcctcttctgttccgtacggagacgctgatgccggggttgttgcagcc
aaggcagaagaatcggtgtcctacgagttggtacaggatcttcaggccctgcagcggtgg
gtggaccgggccatgcagataggcattgtggccgtggatactgaaaccgatggcctagat
cccatgcaggcgcgtcttgtcggcatgtctttggcggttggtccggggcaggcctgctac
attcccctgcggcatggaatgcagcagcaacagggtgatcttctggcaggaccaggaccg
gaaaaaccgcagcaggttgcaatagcggatgcggttgccatcctgcagcctctctttctg
gatcgcagtgtcctgaaggttgggcacaatatcaagtttgaccttcatgtcctagcccgc
gaggcgctcgtgttaacgccggtggatgatacgatggtgttgtcctatgtgctggatgct
gccagccacggtcatggcatggatgagctggcagagcgccatctggggtaccagaccatc
cgctatgaggatgtgtgcgggaagggcaaggcagcggttacctttgatcaggttcctctg
gacaaagccttgtcctatgctgccgaagacgccgacatcaccttgcgcctgcatacactg
ttccgtgaccggctgacagctgagcgcatggtggctgtttatgagatgctcgatcgtccc
ctgatacctgtcttgttcgccatggaagaggaggggattgccgtcaatcgtacggcgctg
gagtccttgtcatctgactttgcggggcgcatggtgaccctagaagcagacatacaagat
ctggcgggtgaggctttcaatgtggcctcccccaaacagctgggtgatatcctgtttggt
cgcatggggcttaaaggcggcaggaaaagtgcccggaccggtgcatggtcaacggatgcc
gaggtactggagtccctggccgccgaagggcatgcattgccgcagaaggttctggattgg
cgggcccttgccaagctgaaaagcacctataccgatgccttggtgcgtcagataaacccc
cgttccggcagggtccatacgcgttttgcgatgacagtcacgaccacggggcggctgtcg
tccaatgatccaaatttgcagaatattccgatacggaccgaggaagggcgtaaaattagg
caagcatttgtggcgcgtccgggctgcgtgttgctgtcggcagactattcacagatcgaa
ctgcgcttggtggcccatgttgcttctgttgccgccctcagggaagccttccacaacgat
caggatattcatgccatgacggcaagccgtgttttcggggtgcctgttgcgggaatggat
ccgatgctgcgccgacgggccaaggcgattaatttcgggattatttacggcatatcggcc
tttggtcttgcgcgtcagcttggcatttccaacggagaggccaaggcgttcatcgatgcg
tattttgccatgttccctgaaattcgcgactatatggaacagacgattgagcaggcgcgc
cgacagggatttgtaagaaccttgttcggccgtaagtgctttacaccggatatccagagc
aaaaacccggcccagcgtgcctttgccgagcgggctgctgtgaatgctccgatacagggg
agtgcagccgatatcctgaagaaggcgatgatcgcactgccattggctctggaggagaaa
gggctgaaggcacggttactgttgcaggttcatgacgagctggttttcgatgtgccccgg
gatcaggtcgatgagacctgttctgtcgtgcgagcagtcatggagcgtgcggctgtgttg
tcggttccgctgattgtggatacgggcgttgccgatacatgggctggcgcgcactag
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