KEGG   Haematospirillum jordaniae: AY555_03070
Entry
AY555_03070       CDS       T04366                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
hjo  Haematospirillum jordaniae
Brite
KEGG Orthology (KO) [BR:hjo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hjo03016]
    AY555_03070
Enzymes [BR:hjo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     AY555_03070
Transfer RNA biogenesis [BR:hjo03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    AY555_03070
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2 RNase_T
Other DBs
NCBI-ProteinID: AMW34334
UniProt: A0A143DC83
LinkDB
Position
complement(615379..615996)
AA seq 205 aa
MTIYYHRGDLPADVGFSGAVAIDTETTGLSPVRDRLCVVQLSGGDGNAHVVHVGGALGYD
CPNLKAVLADPSRLKIFHYARFDIAILRKYLGVACAPVYCTKIASRLTRTNTDAHGLRSL
VQALTGVELDKQQQSSDWGTDGELTAEQLSYAASDVLYLHALKDRLDALLVRERRTHLAE
SCFQFLPIRAELDLLDWHSLDIFSH
NT seq 618 nt   +upstreamnt  +downstreamnt
atgactatatactatcatcgtggcgatctgccggctgacgttggtttttcgggagcggtt
gccattgataccgagacaaccgggttgtcccccgtacgggatcgtctgtgtgttgtgcaa
ctctccggaggagacggcaatgcgcatgttgttcatgtcggtggcgcattggggtatgat
tgcccgaacctgaaagccgttttggccgatccttcgcgtctcaagatctttcactatgcc
cgctttgatattgccatacttcgcaagtatctgggggtagcctgtgcgccagtttattgc
accaagatcgcatcccgtctgacgcgtaccaatacggatgcccatggtttgcggtccttg
gtccaggccctgacaggtgtggagctggacaaacagcaacagtcttcagactggggaacg
gatggtgagttgacggcagaacaattgtcttatgcggcctcggatgtattgtatctgcat
gccctgaaagatcgtctggatgctcttcttgtgcgggagcgtcgtacccatcttgccgag
tcttgcttccagtttcttccgatccgtgcggagctggatctgctggattggcatagcctt
gatatcttcagtcactga

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