Haematospirillum jordaniae: AY555_03845
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Entry
AY555_03845 CDS
T04366
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
hjo
Haematospirillum jordaniae
Pathway
hjo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AY555_03845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hjo03021
]
AY555_03845
03019 Messenger RNA biogenesis [BR:
hjo03019
]
AY555_03845
Transcription machinery [BR:
hjo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AY555_03845
Messenger RNA biogenesis [BR:
hjo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AY555_03845
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
AAA_25
AAA_22
S1CSD-TOTE-2
AAA
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
AMW34462
UniProt:
A0A143DCL6
LinkDB
All DBs
Position
771205..772461
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AA seq
418 aa
AA seq
DB search
MHLKDLKKKTPADLLKLAEELDVENASSLRKQDILFGILKSLAGRGTAIYGTGVLEVLQD
GFGFLRSPEANYLPGPDDIYVSPTQVRHFGLRTGDTVEGQIRAPNNGERYFALLRIDTIN
FEDPESVRHRINFDNLTPLYPSRKIKLETHDPTNRNMMPRVIEMVSPLGFGQRGLIVAPP
RTGKTVMLQNIATSIAANHPDAYLIVLLIDERPEEVTDMARSVRGEVISSTFDEPANRHV
QVAEMVIEKAKRLVEHKRDVIILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSELILDRKLADRRTFPAIDI
NRSGTRKEELLVDRQTLQKMWVLRRILNPLGTQDGMDFLLGKLKETKDNNDFFEAMNN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgaaggacctgaaaaagaaaacaccggccgatcttctcaaattggctgaagaa
cttgatgttgagaatgccagcagtctgcggaaacaggatatcctgtttgggatcctgaag
tcccttgccggacgtggtacggcgatttatggaaccggtgtcctggaggttctgcaggat
ggttttggttttctgcgttctccggaagccaactatcttccaggtccggatgatatctac
gtcagcccgacccaggttcgtcacttcggcctgaggacgggtgacacggttgaaggccag
atccgtgcccccaataacggggagcgttattttgccttgttgcgtattgacacgatcaat
ttcgaggatccggaatcggtccgtcatcgcattaactttgataacctgacgcctctgtat
ccctcacggaagatcaagctggaaacgcatgatccgaccaaccggaacatgatgccccgt
gttattgaaatggtatcgccgcttggtttcgggcaacgtggcctgattgtcgcaccaccg
cgaaccggtaaaaccgtgatgttgcagaacattgcgacttccattgccgccaatcatccc
gatgcctatctgattgtgcttctgatcgacgaacgtccggaagaagtgaccgatatggct
cgcagtgtccggggggaggttatttcctcaacgttcgatgaaccggccaaccgccatgtt
caggttgcggaaatggtgatcgagaaagccaagcggctggttgagcacaaacgggatgta
attatcctccttgattccattacccgtcttgcccgggcctacaacacggttgttccatct
tcaggaaaggttctgaccggtggcgttgacgccaatgccctgcaaaggcccaagcgcttt
ttcggtgcagcccgtaatatcgaagaaggcggttccctgaccattattgcgacggccctg
attgatacgggctcccgtatggatgaagtgatcttcgaagagttcaagggaaccggtaac
tccgaactgatcctagaccgtaaacttgctgacaggcggacattcccggcaattgacatc
aatcgttccggcacccgcaaggaagaacttctggttgatcgccagaccttgcagaaaatg
tgggttctacgccgtatcctcaacccattgggtacacaggatggtatggacttcctgctt
gggaagctaaaggaaacaaaagataacaatgacttctttgaagccatgaacaactga
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