Haematospirillum jordaniae: AY555_04030
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Entry
AY555_04030 CDS
T04366
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hjo
Haematospirillum jordaniae
Pathway
hjo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AY555_04030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hjo03019
]
AY555_04030
03016 Transfer RNA biogenesis [BR:
hjo03016
]
AY555_04030
Enzymes [BR:
hjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AY555_04030
Messenger RNA biogenesis [BR:
hjo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AY555_04030
Transfer RNA biogenesis [BR:
hjo03016
]
Prokaryotic type
tRNA degradation factors
AY555_04030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AMW34490
UniProt:
A0A143DD76
LinkDB
All DBs
Position
821559..823691
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AA seq
710 aa
AA seq
DB search
MSMFKVYRKEIQFGGRPLVLETGRIARQADGAVLVTYGETSVLCTAVGAKAPKPGQDFFP
LTVNYQEKSFAAGKIPGGFFKREGRPSERETLTSRLIDRPIRPLFHDDYKCETQVVATVL
SHDLENEPDIVSMIGASAALTLSGLPFLGPIGAARVGYINGQYVLNPTVSAQKDSVLDLV
VAGTSEGVLMVESEAQELSEDIMLGAVAFGHEACQAVIDAIIDLAEQCAREPRDLPPSSP
EKAAVSALFETFRKDLETAYRIPAKAARQDAVAAVKEKAFAALDSSNEAALQVAPEVFKV
LEADVVRSNILNTGVRIDGRDTRTVRAIESMVGILPRTHGSALFTRGETQALVVATLGTG
QDEQVIDALGGEYRENFMLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAVHPMLPDRD
AFPYTIRVVSEVTESNGSSSMATVCGSSLALMDAGVPLKRPVAGIAMGLIKEDERFAVLS
DILGDEDHLGDMDFKVAGTDQGVTSLQMDIKITSITRDIMEIALRQAREGRLHILGEMSR
ALGTARSEVSSIAPRITTLKIDAGKIRDVIGSGGKVIREITEQTGTKIDIDDDGTIKIAA
VDNEAAQKAVNWIRGIVAEPELGEIYQGKVVKLMDFGAFVNFLGKRDGLVHISEMSDQRG
SKPSDHVNQGDSVWVKCIGFDDRGKIKLSMKQVDQATGKAKVCATEETSG
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgttcaaggtgtatcgcaaggagatccagttcggtggacggcccttggttctg
gaaaccggtcgtattgcccgtcaggctgatggggctgttctggtgacctatggcgaaacc
tctgttttgtgtaccgctgttggggccaaggcacccaagccgggccaagactttttcccg
ctgaccgtgaactatcaggaaaagagctttgccgccggcaagatcccgggtggtttcttt
aagcgtgaagggcgcccgtccgagcgggaaacactgacttcgcgtttgattgaccgtccg
attcgtcccctgttccatgacgattacaagtgtgagacacaggttgtcgcgacggttctg
tcccatgacttggaaaacgagccggatatcgtgtccatgatcggtgcttcggcggcgctt
accctgtcggggctgccgttccttgggccaatcggggcggcgcgcgtgggctacataaac
ggccagtacgttctgaacccgacggtgtcagcacagaaggacagcgttttggatctggtg
gtggccggtacctctgaaggggtgctgatggtcgagtccgaggctcaggaactgtctgaa
gatatcatgctgggtgctgttgcctttggtcatgaagcctgccaagccgttatcgatgcc
ataattgacttggctgagcagtgcgcccgcgagccacgtgacctgccgccatcctcgccg
gaaaaggcagcggtaagtgccctgttcgaaacgttccgcaaggatctggagacggcctat
cgcatccctgccaaagctgcgcgccaggatgcagttgctgctgtgaaggagaaagcgttc
gcagccctggattcctccaacgaggccgcgcttcaggtagcccctgaagtgttcaaggtg
ttggaagctgatgttgtccgctccaatatcctgaataccggtgtgcgtattgatgggcgt
gatacccgtactgtccgtgcgattgagtcgatggtcggtattctgccgcgcacgcatggg
tcggccctgtttacccgcggtgagacccaggctttggtcgttgccacgttgggcactggg
caggatgagcaggtcattgatgccttgggtggtgagtaccgtgaaaacttcatgcttcac
tacaacttccccccttactctgtcggggaagcaggtcgcatggggtcgcccggtcgccgt
gaaatcggccatggtaaacttgcttggcgtgcggttcaccccatgctgccggaccgtgat
gccttcccttataccattcgtgttgtgtcagaggtgacagagtccaacggttcgtcatcg
atggccacggtgtgcggttcgtccctggcccttatggatgccggtgttccgctgaagcgt
ccggttgccggtattgccatggggttgatcaaggaagacgagcgtttcgctgtgctgtcc
gacattcttggtgatgaagatcacctgggtgacatggacttcaaggttgccggaaccgat
cagggtgtgacatccctacagatggacatcaagatcacgtccattacccgggatattatg
gaaattgccctgcgtcaggcccgtgaagggcgtctgcatatcttgggcgagatgtccaga
gcgcttggcacggcgcggagtgaggtttcctcgatcgctccgcgtatcaccacccttaaa
attgatgccggcaagattcgtgatgtcattgggtctggtggcaaggtcatccgcgagatt
accgagcagacaggcaccaagatcgacatcgatgatgacggaaccatcaagattgcagcg
gttgacaatgaagcagcccagaaggctgtcaactggatccgtggcattgttgcagagccc
gagcttggcgagatttaccagggtaaggttgtcaagctgatggactttggtgcgtttgtt
aacttccttggcaagcgtgatgggttggttcatatctccgagatgtcggatcagcgcggc
agcaagccgtctgatcatgtcaatcagggtgattcagtctgggtaaagtgcatcggcttt
gatgaccgtggcaagatcaagctgtcgatgaagcaggttgatcaagcaacaggcaaggcc
aaggtgtgcgcgacggaagaaacgtcgggctga
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