Haematospirillum jordaniae: AY555_04135
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Entry
AY555_04135 CDS
T04366
Name
(GenBank) DNA helicase UvrD
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hjo
Haematospirillum jordaniae
Brite
KEGG Orthology (KO) [BR:
hjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hjo03400
]
AY555_04135
Enzymes [BR:
hjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AY555_04135
DNA repair and recombination proteins [BR:
hjo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AY555_04135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
Motif
Other DBs
NCBI-ProteinID:
AMW34506
UniProt:
A0A143DCV6
LinkDB
All DBs
Position
complement(842494..845994)
Genome browser
AA seq
1166 aa
AA seq
DB search
MKTMGIRAGEAQKKAANPAVSAWVGANAGTGKTKVLTDRVLNLMLSGSAPERILCLTFTR
AAAAEMSTRLARTLSEWAIATDEHLEHALTALLGNAPDHKTCNTARRLFARMLDVPGGMK
IQTIHAFCQALLRRFPLEAGIAPHFAVMEDRDAATLMLEAREHILLAARQDETSDLHCAL
ALVTSHVHEDAFNALMADIATHRGRLSRLLAQGMEPVSFRLAQRLGLDINDTPDLILRQA
AQDDHVPVAQLKNLAIALARGGKTDLEAAERITDWLAADTPKRCATWPDYGRAFLTADGE
PRSRSRFPSKAVRENNPDILETLDAETERIVRTNTRLKAAVTFRATLALLTLARSMTAEY
QIRKERAGKMDFDDLILTTRRLLQHTDTAAWVLYKLDGGLDHVLIDEAQDTNPDQWAVIK
ALVSDFFDGHGRDRPQGTRTLFAVGDRKQSIYSFQGADPDEFDRSRALFAHMVPQSGYPF
EDITLDVSFRSTAAILQAVDAVFRQGHAVDGVAATGEPVSHHPFRTGQGGLVEIWPPVPA
TALEEPPPWKPPVERIQGESAPSRLARLLARRIQRMTNGSDRLESQGRPVRPGDILVLVR
RRSGFVDDLVRCLKDLDVPVAGVDRMVLSEQMAVMDLIALGYSLLLPEDDLTLACVLKGP
ILGLTEEQLFTVSHGRQRGVSLWRSLREHRDQDPAFASAWATLRGLMEKADFLPPFELFS
HILGPLGGRSRLLARLGPDAADPIDEFLNLALTYDRGHPPNLQAFLHWLETGSQDIRRDL
EENDNNGLGAVRIMTVHGSKGLQAPVVFLPDTRQVPTRVPALLWDESGNDEHPAMFWPPS
AAFREPVTEALVTAERTTAAREYRRLLYVAMTRAEDRLYICGWDTRRESPEDSWYNLIQG
ALAPLAETVRDPFLEADGTLETPTVLRLSCPQDVPPRTQEHRADAPATVSAVPSLLRILP
AAEPIPSRPLMPSRPPVADPPATSPLLHRAQDENRRQRGKIIHTLLQYLPERKQIVREHA
ARAFLSRPIWGLDPAEQDIILQKVMSVLNTPTFSHLFGLGSLAEVPVSGVIGKTSISGVI
DRLLVEHDTVTAVDFKSGHHPPQHIHDVPEAYLFQMAAYRAVLRRIWPERDIQCALLWTE
DLSLMTLPCDLLDAALPTDPQMNQTT
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccatggggatccgtgccggcgaggcccagaaaaaagcagccaacccggctgtc
tcggcatgggtgggggcaaacgccggaaccggaaagacaaaggtgctgacggaccgggtc
ctgaacctgatgctgtcaggcagtgcaccggagcgtattctgtgcttaaccttcacccgg
gcagccgctgcggaaatgtccacacgtctggcccgaaccctttctgaatgggccattgca
acagacgagcatctcgaacacgccctgacagcccttctaggaaatgcaccggatcataaa
acctgcaacacggcgcgacgtctgtttgcccgcatgctggatgtgccggggggcatgaaa
atccagacgatccatgccttctgccaggcgcttctgcggcgctttcccttggaggcaggg
atcgcaccccactttgcagtcatggaagaccgtgatgccgccacactgatgcttgaagcc
cgcgagcatattcttctggcggcacgacaggacgaaacatctgacctgcactgcgctctg
gctcttgtgaccagccatgtccacgaagatgccttcaatgccctgatggccgatatcgca
acccatcgggggcggctgtcacggcttctggcacaggggatggagcccgtgtctttccgt
cttgcccagcgcctgggcctggatatcaacgatacgccggacctcattctgaggcaggcc
gcccaggatgaccacgtacctgttgcgcagctgaagaaccttgccatagccctagcccgg
gggggaaagactgaccttgaggcagcagagcgcataaccgattggcttgcggctgacacc
ccgaaacgttgcgcaacgtggccggactatggccgtgccttcctgacggcggatggagaa
ccacggtcacggtcccgtttcccctcaaaagccgtgcgggagaacaacccggacatccta
gaaacactggatgccgaaacagagcggattgtccgcaccaacacccgcctgaaagccgcc
gtcacgttcagggcgactctggccttgctgacactggcccggtccatgaccgcagagtac
cagatccgcaaggagcgggcggggaagatggactttgatgacctgattctcacgacacgc
cggcttctacagcacaccgatacggccgcctgggttctctacaaacttgacggcggcctg
gaccatgtcctgatcgatgaagcacaagacaccaacccagaccaatgggctgtcatcaag
gctctggtatctgacttcttcgacggacacgggcgggatcgcccacagggaacacgcacc
cttttcgcggtgggggaccgcaagcagtccatctactctttccagggggcggacccggat
gagttcgaccgcagccgcgccctttttgcccacatggtcccgcaatctggttatccgttc
gaggatataaccttggatgtttccttccggtccacagcagccattcttcaggctgttgac
gctgtcttccggcaaggccacgcggtcgatggtgttgccgctaccggggaaccggtcagc
caccatccgttccggaccggacaggggggattggtggaaatctggccacctgtccctgca
acagccctggaagaacctcccccatggaaaccgcccgtcgaacgcatccagggcgagagc
gcaccatcccggttggcccggttgctggcacggcgtatccagcggatgaccaatggcagc
gacagactggagagccagggacgaccggttcgccccggtgatatcctggttctggtacgg
cggcgcagcggctttgttgatgatctggtccgttgcctgaaagatctggatgtcccggtg
gcgggcgtcgaccgaatggtcctgagcgaacagatggcggtcatggacctgatcgcactg
ggatacagcctgctgttacccgaagatgacctgaccctggcctgtgtactgaaaggcccc
attctgggcctgacagaagagcagttgttcacggtttcccacgggcgccaacgcggtgtc
agcctgtggcgatccctgcgcgaacaccgtgaccaggatccggcctttgcctcggcctgg
gcaaccctgcgtggattgatggagaaagcggactttctgccgcctttcgaactgttcagc
cacattctggggccgttgggcggtcgcagcagacttttggcccggttgggacccgacgcc
gccgacccgatcgacgaatttctgaaccttgccctgacctatgaccgcggccaccctcct
aacctgcaagccttcctgcactggctggaaaccggctcccaggatatccgccgcgaccta
gaggaaaatgacaacaatggcctgggtgcggtacgcatcatgaccgtacacggctccaaa
ggcttacaggcccccgttgtttttctgccggatacccgtcaagtaccgacccgggtaccg
gctcttctgtgggacgagtcaggcaacgacgaacaccctgccatgttctggccaccatcc
gcagccttccgcgagcctgtgaccgaggccctggttacagcagaacgaacaaccgcagcc
cgggaataccgtcgcctgctttacgtggccatgacacgggctgaggacaggctttacatc
tgcggctgggacacccgtcgggaatcccccgaagacagttggtacaacctgatacaaggt
gccctagccccgctggccgaaacagtccgggacccgttcctggaagcggatggaaccctt
gagacaccaaccgtgctgcgattgtcctgcccacaggatgttcccccgcgaacacaggaa
cacagggccgatgccccggccacggtttctgctgttccgtccctgctgcgtatcctgcct
gctgcagagccgattccctcacgccccctgatgccatcccggccaccggtcgctgatcca
ccggccacctctcccctcctgcatagagcacaagacgagaaccgccggcagcggggcaag
atcattcataccctcctgcaatatctgccggaacgaaaacagattgtcagggaacacgcg
gccagagccttcctgtcccgtccgatctgggggctggatccagctgagcaggatatcatc
ctgcaaaaggttatgagcgtcctgaacacacccactttttcacacctctttggcctaggg
tccctggccgaggttcctgtttcgggtgtcatcgggaaaaccagtatatccggtgtgatt
gaccgccttctggtcgagcacgatacggtgacagcggtagatttcaaatccggccatcat
ccgccacaacatattcatgacgtaccggaggcctatctgttccagatggctgcctaccgg
gctgtcctgcgcaggatctggccagagcgtgacatacagtgcgcgctgttgtggacagaa
gatctgtcgcttatgaccctgccctgcgatctcctagatgcagccctgccaaccgaccct
caaatgaaccaaacaacttga
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