KEGG   Natrinema thermotolerans: DVR14_07260
Entry
DVR14_07260       CDS       T05948                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
hjt  Natrinema thermotolerans
Pathway
hjt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hjt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DVR14_07260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hjt03019]
    DVR14_07260
Messenger RNA biogenesis [BR:hjt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DVR14_07260
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B_2 Lactamase_B RMMBL
Other DBs
NCBI-ProteinID: QCC58447
LinkDB
Position
1101490..1102836
AA seq 448 aa
MEIEIATIGGYEEVGRQMTAVRAGDDIVIFDMGLNLSKVLIHDNIRTEGMHSLDLIDMGA
IPDDRIMSDLEGDVQAIVPTHGHLDHIGAISKLAHRYDAPIIASPFTLELVKGELEEEGK
FDADNDLIAMDPGETTSIGDSGVLDLEFVNVTHSIVDAINPVLHTPEGAVVYGLDKRMDH
TPVIGDPIDMERFREIGREGEGVLCYIEDCTNANKKGRTPSESVAREHLRDVLYSMEDYD
GGIVATTFSSHIARVKSLIEFARDIGRQPILLGRSMETYSGTAKQIGIDFPSDVEMVGYR
QSIEQTFERIMNEGKENFLPVVTGHQGEPRATLTRMGRGETPYELEDGDKVVFSARVIPE
PTNEGQRYQAEKLLRMQGARIYDDIHVSGHLCQEGHYEMLDALQPEHVIPAHQNMSGFSG
YVDLATNQGYKLGRDLHVTSNGNIIELV
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggaaatcgaaattgcgacgatcggcggttacgaggaagtcggccgacagatgacggct
gtccgcgctggcgacgacatcgtgatcttcgacatgggtctgaacctgtcgaaggtactc
attcacgacaacatccgaaccgaaggcatgcacagtctcgatctgatcgacatgggtgcc
attccggacgaccggatcatgagcgatctcgagggcgacgttcaggcgatcgtgccgacg
cacggccacctcgaccacatcggtgcgatcagcaaactcgcacaccgatacgacgccccc
atcatcgcctccccgttcacgctcgaactggtcaaaggcgaactcgaggaggagggcaag
ttcgacgccgacaacgatctgatcgcgatggatcccggcgaaacgacgtcgatcggcgac
agcggcgtcctcgatctcgagttcgtcaacgtcacccactccatcgtcgacgcgatcaac
cccgtcctccacacgcccgaaggcgccgtcgtctacgggctggacaaacggatggaccac
acccccgtcatcggcgacccgatcgacatggaacggttccgtgagatcggtcgcgaaggt
gagggtgtcctctgttacatcgaagactgtaccaacgccaacaagaaggggcggactccc
tccgagagcgtcgcccgcgaacacctccgtgacgtcctctacagcatggaggactacgac
ggcggcatcgtcgcgacgacgttctcgagtcacatcgcacgggtgaagtctctcatcgag
ttcgctcgagatatcggccggcagccgatcctgctgggccgctcgatggaaacctactcc
ggcaccgcgaaacaaatcgggatcgacttcccctccgacgtcgagatggtcggctaccgc
caatccatcgagcagacgttcgagcggatcatgaacgagggcaaggaaaacttcctcccc
gtcgttaccggtcatcagggcgagccgcgtgcgaccctcacccgtatgggccgcggcgag
acgccctacgaactggaggacggtgacaaagtcgtcttctcggcacgggtgattccggaa
ccgaccaacgagggccagcgctaccaggccgagaaactcctccgcatgcaaggtgcgcgc
atctacgacgatattcacgtctcggggcacctctgtcaggagggtcactacgagatgctc
gatgcgctgcagcccgaacacgtgattccggcacaccagaacatgagcggcttctcggga
tacgtcgatctggccacgaatcagggatacaagctcggacgggatctgcacgtcacctcg
aacgggaatatcatcgaactcgtctga

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