Natrinema thermotolerans: DVR14_07260
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Entry
DVR14_07260 CDS
T05948
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
hjt
Natrinema thermotolerans
Pathway
hjt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hjt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DVR14_07260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hjt03019
]
DVR14_07260
Messenger RNA biogenesis [BR:
hjt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DVR14_07260
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B_2
Lactamase_B
RMMBL
Motif
Other DBs
NCBI-ProteinID:
QCC58447
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Position
1101490..1102836
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AA seq
448 aa
AA seq
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MEIEIATIGGYEEVGRQMTAVRAGDDIVIFDMGLNLSKVLIHDNIRTEGMHSLDLIDMGA
IPDDRIMSDLEGDVQAIVPTHGHLDHIGAISKLAHRYDAPIIASPFTLELVKGELEEEGK
FDADNDLIAMDPGETTSIGDSGVLDLEFVNVTHSIVDAINPVLHTPEGAVVYGLDKRMDH
TPVIGDPIDMERFREIGREGEGVLCYIEDCTNANKKGRTPSESVAREHLRDVLYSMEDYD
GGIVATTFSSHIARVKSLIEFARDIGRQPILLGRSMETYSGTAKQIGIDFPSDVEMVGYR
QSIEQTFERIMNEGKENFLPVVTGHQGEPRATLTRMGRGETPYELEDGDKVVFSARVIPE
PTNEGQRYQAEKLLRMQGARIYDDIHVSGHLCQEGHYEMLDALQPEHVIPAHQNMSGFSG
YVDLATNQGYKLGRDLHVTSNGNIIELV
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgaaattgcgacgatcggcggttacgaggaagtcggccgacagatgacggct
gtccgcgctggcgacgacatcgtgatcttcgacatgggtctgaacctgtcgaaggtactc
attcacgacaacatccgaaccgaaggcatgcacagtctcgatctgatcgacatgggtgcc
attccggacgaccggatcatgagcgatctcgagggcgacgttcaggcgatcgtgccgacg
cacggccacctcgaccacatcggtgcgatcagcaaactcgcacaccgatacgacgccccc
atcatcgcctccccgttcacgctcgaactggtcaaaggcgaactcgaggaggagggcaag
ttcgacgccgacaacgatctgatcgcgatggatcccggcgaaacgacgtcgatcggcgac
agcggcgtcctcgatctcgagttcgtcaacgtcacccactccatcgtcgacgcgatcaac
cccgtcctccacacgcccgaaggcgccgtcgtctacgggctggacaaacggatggaccac
acccccgtcatcggcgacccgatcgacatggaacggttccgtgagatcggtcgcgaaggt
gagggtgtcctctgttacatcgaagactgtaccaacgccaacaagaaggggcggactccc
tccgagagcgtcgcccgcgaacacctccgtgacgtcctctacagcatggaggactacgac
ggcggcatcgtcgcgacgacgttctcgagtcacatcgcacgggtgaagtctctcatcgag
ttcgctcgagatatcggccggcagccgatcctgctgggccgctcgatggaaacctactcc
ggcaccgcgaaacaaatcgggatcgacttcccctccgacgtcgagatggtcggctaccgc
caatccatcgagcagacgttcgagcggatcatgaacgagggcaaggaaaacttcctcccc
gtcgttaccggtcatcagggcgagccgcgtgcgaccctcacccgtatgggccgcggcgag
acgccctacgaactggaggacggtgacaaagtcgtcttctcggcacgggtgattccggaa
ccgaccaacgagggccagcgctaccaggccgagaaactcctccgcatgcaaggtgcgcgc
atctacgacgatattcacgtctcggggcacctctgtcaggagggtcactacgagatgctc
gatgcgctgcagcccgaacacgtgattccggcacaccagaacatgagcggcttctcggga
tacgtcgatctggccacgaatcagggatacaagctcggacgggatctgcacgtcacctcg
aacgggaatatcatcgaactcgtctga
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