Natrinema thermotolerans: DVR14_08220
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Entry
DVR14_08220 CDS
T05948
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
hjt
Natrinema thermotolerans
Pathway
hjt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hjt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DVR14_08220 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hjt03021
]
DVR14_08220 (rpoB)
Enzymes [BR:
hjt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DVR14_08220 (rpoB)
Transcription machinery [BR:
hjt03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
DVR14_08220 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Auto_anti-p27
McsA
Motif
Other DBs
NCBI-ProteinID:
QCC58614
LinkDB
All DBs
Position
complement(1299382..1301211)
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AA seq
609 aa
AA seq
DB search
MSSQEREAKVYVNGSLVGTHPDPHELAEQIREARRIGDVSEMVNVSVKDRTREVIVNADA
GRARRPLLVVEDGEPRISEQEIEALQEGDLEFEDLVDHGYIEFIDAEEEEDILVGVDEDD
LTENHTHLEIDPSLIFSIGAGMIPYPEHNASPRITMGAGMIKQSLGLPSANYRIRPDTRQ
HLLHYPQLSMVKTQTTEQIGYDERPAAQNFVVAVMSYEGFNIEDALVMNKASVERALARS
HFFRTYEGEERRYPGGQEDRFEIPSQDVRGARGEEAYNHLDEDGLVNPETTVDENSVLLG
KTSPPRFLEEPDDMGGLSPQKRRETSVTMRSGESGIVDTVTLMEGEDGSKLSKVSVRDER
IPELGDKFASRHGQKGVVGHLAPQEDMPFTEEGVVPDLVLNPHALPSRMTVGHILEMIGG
KLGSMEGRRVDGTPFLGEDKDELREGLEEAGFDSAGKETMYSGITGEKIEAEIFVGVIFY
QKLYHMVSNKLHARSRGPVQVLTRQPTEGRAREGGLRIGEMERDVFIGHGAAMTLKERLL
DESDREFIHVCANCGMSAVENVEQRRVYCPNCDEETDIHEIEMSYAFKLLLDEMKALGIA
PRLELEDAV
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccaagaacgagaggcgaaagtctacgtcaacggatcgctggtggggacccac
cccgatccgcacgaactcgcagaacagatccgagaagcacgacgcatcggcgacgtctcc
gagatggtcaacgtctcggtcaaagaccgcacccgcgaagtgatcgtcaacgccgacgcc
ggccgcgcgcgacgaccacttctggtcgtcgaggacggcgaaccgcgcatctccgagcag
gaaatcgaggcgctccaggagggtgatctcgagttcgaagatctggtcgatcacggctac
atcgaattcatcgacgccgaggaggaagaggacatcctcgtgggcgtcgacgaggacgat
ctgaccgagaaccacacccacctcgagatcgacccgtcgctgatcttctcgatcggtgcg
gggatgatcccctaccccgaacacaacgccagcccccgcattacgatgggggcggggatg
atcaagcagtcgctcggcctgccgagcgcgaactaccgcattcggccggacacgcgccag
cacctgctgcattacccgcagctctcgatggtcaagacccagacgaccgaacagatcggc
tacgacgagcggcccgccgcccagaacttcgtcgtcgccgtgatgagctacgaggggttc
aacatcgaggacgcgctggtcatgaacaaggcaagcgtcgagcgtgcgctcgctcgctcc
catttcttccggacctacgagggcgaggaacgccggtatccgggcggccaggaggaccgc
ttcgagatcccctcccaggacgtccgcggggcccgcggcgaggaagcctacaatcacctc
gacgaggacggactggtcaaccccgagacgacggtcgacgagaactccgtcctgctcggg
aagacgtccccgccgcgattcctcgaggagcccgacgacatgggtggactctcaccccag
aaacgacgcgagacctccgtcacaatgcgctcgggcgagtcggggatcgtcgacaccgtc
acgctcatggagggcgaggacggctcgaagctctcgaaggtctcggtgcgtgacgaacgg
atccccgaactcggggacaagttcgccagccgccacggccagaagggggtcgtcggccac
ctcgcaccccaggaggacatgcccttcaccgaggaaggtgtcgtccccgacctcgtgctg
aacccccacgccctgccgtcccggatgaccgtcggccacatcctcgagatgatcggcggc
aaactcggctcgatggaaggtcgccgcgtcgacgggacgcccttcctcggcgaggacaag
gacgaactccgtgaggggctcgaggaggccggcttcgattccgccggcaaggagaccatg
tactcgggcatcacgggcgagaagatcgaggccgagatcttcgtcggcgtgatcttctac
cagaagctctaccacatggtctcgaacaagctgcacgcccgctcgcgcgggccggtgcag
gtgctgacccgccagcccaccgaggggcgggcccgcgagggcgggctccgtatcggggag
atggaacgcgacgtgttcatcggccacggggcggccatgacgctgaaagaacgactcctc
gacgaatccgaccgtgagttcatccacgtctgtgccaactgtgggatgagcgcggtcgag
aacgtcgaacaacggcgtgtctactgtccgaactgcgacgaggagaccgatatccacgaa
atcgagatgagctacgcgttcaagctcctcttggacgagatgaaggcgctgggtatcgca
ccgcgactcgaactggaggacgccgtctaa
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