Natrinema thermotolerans: DVR14_08545
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Entry
DVR14_08545 CDS
T05948
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hjt
Natrinema thermotolerans
Pathway
hjt03022
Basal transcription factors
hjt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hjt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DVR14_08545
09124 Replication and repair
03420 Nucleotide excision repair
DVR14_08545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hjt03021
]
DVR14_08545
03036 Chromosome and associated proteins [BR:
hjt03036
]
DVR14_08545
03400 DNA repair and recombination proteins [BR:
hjt03400
]
DVR14_08545
Enzymes [BR:
hjt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
DVR14_08545
Transcription machinery [BR:
hjt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DVR14_08545
Chromosome and associated proteins [BR:
hjt03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
DVR14_08545
DNA repair and recombination proteins [BR:
hjt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DVR14_08545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
ATPase
AAA_25
AAA_34
HBB
PhoH
GvpD_P-loop
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
QCC58670
LinkDB
All DBs
Position
complement(1370470..1372638)
Genome browser
AA seq
722 aa
AA seq
DB search
MSETGYMRFFPYDRPYENQREAMDRIHNALHRGQDVLFEGACGTGKTLSSLVPALEVARE
QDKTVVITTNVHQQMRQFVAEARAITREESIRTVVFKGKGSMCHIDVGYEECQTLRDNTR
AVVDAEQDREQLERRQRELLAESQDGDGSAADARSAVMDELEAIEERLEDLGDQNVCDYY
RNNLTEDTDDFFGWLFEDVRTPDEIYEYAERQELCGYELLKEGIEGVDLVVCNYHHLLDS
TIREQFFRWLGRDPEDVIAVFDEAHNVEDAAREHATRTCSERTFESALEELADSDDPRAE
DAANVLSAFHRALVEIYEDSFGFGDREGVGENWTDVPIANDDRKDDLTLEFLQRYSGRGI
DDDLEAAMKLGQELDEEYEEAYREGETATRTECQTLQAAAFVSAWMTEGSTEGLYPVVAV
TRDAGTDEIYGRVELYSCLPRQVTGQLFDEIHATVLMSATLQPFEVTEDVLGIEDAVSMA
YGLQFAEENRRTFAVETPPLFSSDRDDPAVQADVTETIHDAVRMTPGNTLAFFPNYGEAS
RYADRLVGRTDRTVYVDEPGQSAEDLRQQFVADDGAVLCTSLWGTLAEGVSFDGDDAHTV
LVVGVPYPHLDDRAEAVQEAYDAAFDGTDTGWRYAVEFPTIRKTRQALGRVIRSPEEVGV
RALLDRRYSRQAKPDLGKYSVNGIFPHAEREELIDIEPGKLKFAMLNFYGGHDAYDGEPP
TP
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgaaaccgggtatatgcgctttttcccgtacgatcggccgtacgagaaccagcgc
gaggcgatggaccgcatccacaacgccctccaccggggacaggacgtcctcttcgagggg
gcctgcgggaccggcaaaaccctctcgtcgctcgtccccgccctcgaggtggctcgcgag
caggacaagactgtcgtcatcacgaccaacgtccaccagcagatgcgtcagttcgtcgcc
gaggcccgcgcgatcacccgcgaggagtcgatccgcacggtcgtcttcaaggggaagggc
tcgatgtgtcacatcgacgtcggctacgaggagtgtcagacgctccgggacaacacccgc
gccgtcgtcgacgccgagcaggatcgcgagcaactcgaacgccgccagcgcgagttgctc
gccgagagtcaggacggcgacggctcggcggccgacgcccgctcggcggtgatggacgaa
ctcgaggccatcgaggagcggctcgaggacctcggagaccagaacgtctgtgactactac
cgcaacaacctgaccgaggacacggacgacttcttcggctggctcttcgaggacgtccgc
acgcccgacgagatctacgagtacgccgagcggcaggaactctgcgggtacgaactcctc
aaggaggggatcgagggcgtcgatctggtcgtctgtaactaccaccacctgctggattcg
accattcgagaacagttcttccggtggctgggtcgcgaccccgaggacgtgatcgccgtc
ttcgacgaggcccacaacgtcgaggacgccgcccgcgaacacgcgacccggacctgctcc
gagcggacgttcgagtcggcgctcgaggagttggccgacagcgacgacccgcgggccgag
gacgccgcgaacgtcctctcggccttccaccgcgcgctcgtcgagatctacgaggactcc
tttggattcggtgatcgggagggagtcggtgagaactggacggacgtccccattgccaac
gacgaccgcaaggacgatctcacgctcgagttcctccagcgctactcgggtcggggaatc
gacgacgatctggaggcggcgatgaagttgggccaggagttagacgaggagtacgaggag
gcctatcgggagggcgagacggccacgcgaacggagtgtcagaccctccaggcagcggcc
ttcgtcagcgcgtggatgaccgagggttcgacggaggggttgtatccggtcgtcgccgtc
acccgcgacgccggtacggacgaaatatacggtcgcgtggagctgtactcctgtctgccc
cggcaggtgaccggccagctcttcgacgagatccacgcgaccgtcctgatgagcgcgacg
ctccagccgttcgaggtcaccgaggacgtactgggaatcgaggacgcggtgtcgatggcc
tacggtctccagttcgccgaggaaaaccgccgaacgttcgccgtcgagacgccgccgctt
ttctcctcggatcgcgacgaccccgcggtccaggcggacgtgaccgagacgatccacgac
gccgtgcggatgacgcccggtaacacgctggcctttttccccaactacggcgaggcgagc
cggtacgccgaccgactcgtcggtcggaccgaccggacggtatacgtggacgagccgggc
cagtcggccgaagacctccgccagcagttcgtcgcggacgacggggcggtgctgtgtacg
tcgctgtggggcaccctcgcggagggggtgagcttcgacggcgacgacgcccacacggtg
ttggtcgtcggcgttccctacccccatctcgatgaccgggccgaggcggtccaggaggcc
tacgacgcggcgttcgacggcaccgatacgggctggcgctacgccgtcgagttcccgacg
atccgcaagacgagacaggcgctcggtcgggtcatccggtcgccggaggaagtcggggtt
cgcgccctgctcgaccggcgctactcccggcaggcgaagcccgatctgggcaagtacagc
gtcaacggcatcttcccccacgcggagcgggaggagctgatcgatatcgagccgggaaaa
ctcaagttcgcgatgctcaacttctacggcggccacgacgcctacgacggcgagccgccg
acgccctga
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