KEGG   Natrinema thermotolerans: DVR14_11975
Entry
DVR14_11975       CDS       T05948                                 
Name
(GenBank) DNA-directed RNA polymerase subunit E''
  KO
K15171  transcription elongation factor SPT4
Organism
hjt  Natrinema thermotolerans
Pathway
hjt03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:hjt00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    DVR14_11975
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hjt03021]
    DVR14_11975
   03019 Messenger RNA biogenesis [BR:hjt03019]
    DVR14_11975
Transcription machinery [BR:hjt03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     DVR14_11975
  RNA polymerase I system
     DVR14_11975
Messenger RNA biogenesis [BR:hjt03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     DVR14_11975
SSDB
Motif
Pfam: Spt4 DZR Zn_ribbon_RRN7 Zn_Ribbon_1
Other DBs
NCBI-ProteinID: QCC59303
LinkDB
Position
2052707..2052904
AA seq 65 aa
MASDRLVCRECHRVNEPDNETCDACNSSSLTEDWAGYVIIAHPEDSEIATEMQITEPGAY
ALKVR
NT seq 198 nt   +upstreamnt  +downstreamnt
atggcatccgatcggctcgtctgtcgcgagtgtcaccgggtcaacgaacccgacaacgag
acgtgtgacgcctgcaactcctcctcgctgaccgaggactgggcgggctacgtcatcatc
gcccaccccgaggacagcgagatcgcgacggagatgcagatcaccgaaccgggcgcgtac
gccctgaaggttcgctga

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