Natrinema thermotolerans: DVR14_12325
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Entry
DVR14_12325 CDS
T05948
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hjt
Natrinema thermotolerans
Brite
KEGG Orthology (KO) [BR:
hjt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hjt03400
]
DVR14_12325
Enzymes [BR:
hjt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DVR14_12325
DNA repair and recombination proteins [BR:
hjt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DVR14_12325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QCC59370
LinkDB
All DBs
Position
complement(2128216..2131974)
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AA seq
1252 aa
AA seq
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MAEDRRSGPDRDPTDGLEAGADRGTSRADAGDAPGHAFAAGVDPKGNQRAVIESDAACTS
VDAGAGTGKTTTMLLRIERAIERGDVDPEDVLVLTFANEAAASIRDAVAERLSPDAAAAI
DVYTYHSFCYRLVREYAYYLGYAPDFEVVTERKRRRIVGRLLASNDYDFAAASASPDEGT
ADLADAVDDFIAAMSREGITPERLRSALPPIRTLELCNEFVLWLERTADAELSFDNEALR
WFNDEDHLETARESLVDYGKLIEYCREKIAEAPDAFRAEDVVRDIDRYLRALQTCVTNAI
EALDLAEPTTKHLPRALFGNEIWGSATERLEQTPFGRLKHYVEFLRLARHYTDVYADYHD
HLEAERALDFDELVRTATDLLDDDAVAPAITGQWTQVYCDEFQDTDATQFSLLTELTDGP
DRPDLLAIGDKDQAIYGWRGTDREGLDRLATTTADHRGIELELNFRSRQEVLALTNACDY
AHQSSKTLREHGRTEGTYDEADPPDRVVKIESDEIPQSTPEQVATTASRLLNGEAENVPQ
RSLGDLAVIVRTNRHAQAVADELRSLRIPYEVSGSPRGEVSPGLQTALSYLRVLVDPGAD
AHLRRVLLYRYRFSESDLATLQRRDGSLYDAVTAAEPSALDLEDPDRLETVRDHLAILEE
YRDVYPLSGFVRRFRDLTRLEWFCTGEERSEFDRIERFVEAYESDGVVQSLSGEFVDALA
ATLRSGGGDRTRGSHSADCVDVMTVHQAKGLEFDTVLVPFLSDEEWCVEGDYADRARDRL
LAATLDDDVDSPLTADLAADSVAEEWRVLHVALTRAANHLFLFGSEYEYDPADGLAATTA
DACLADEIAWSVTGRRMDLWSSLTESVEQVRETYPETVVDRTDEIAASAGETPGTITYYA
GYGDRPIEPLETREAVETVHRLGRQLRHGSLLPVADAASHGGLEADADGRAVPSGRRPSA
LTTDTVRFPVETLATATELPVAMRHSYSAMDTHETCPRKHYLDHVVRAFDDPPATAEPAD
RTVDDTEGTATETDDAASRLVGTVFHDVAEEAFHREYDGREAWREAAVRQLTARDLLEHR
EPVLACIDRYFAATAPAYDRPVADWEPLAAELPFSLEDVADVSGDVVGYVDSVRRLPDGG
LAVLDYKATAERIAPADAVQLALYLRACKQRFDDPIAAVGYVYVGDVDDPRVDLFDPDEL
PAWESVLETLAAVDEPSFTETTPGDHCRHCPHRSLGCGPDEWTPDTGVSDDD
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggaccgccgcagcggccccgaccgcgatccgacggacgggctcgaggccggg
gccgaccgcggaacgagccgagccgacgccggcgacgcgcccggccacgcgttcgcggcc
ggcgtcgaccccaagggcaaccagcgggcggtcatcgagagcgacgcggcctgtacctcc
gtcgacgcgggggctggcaccggaaagacgacgaccatgctgttgcggatcgaacgcgcc
atcgagcgcggcgacgtcgaccccgaggacgtcctcgtgttgaccttcgccaacgaggcc
gccgcgagcatccgcgacgcggtcgccgagcggctctcgcccgacgccgccgcggcgatc
gacgtctacacctaccactcgttctgttaccggctcgtccgcgagtacgcctactacctc
ggctatgcgcctgacttcgaggtcgtcaccgagcgcaagcgccgccggatcgtcggccgg
ctgctcgcgagcaacgactacgacttcgcggccgcctcggccagcccggacgaggggacg
gccgatctcgccgacgcggtcgacgactttatcgccgcgatgagccgggaggggatcacc
cccgagcgactccggtcggcactgccgccgatccgaaccctcgagttgtgcaacgagttc
gtcctctggctcgagcggaccgccgacgcggagttgtccttcgacaacgaggcgctacgg
tggttcaacgacgaggaccacctcgagaccgcccgcgagtcgctggtcgactacggcaag
ctcatcgagtactgccgcgagaagatcgccgaagcgccggacgccttccgggcggaggac
gtggttcgggacatcgatcgctatctgcgggcgctccagacctgcgtgacgaacgcgatc
gaggcgctcgacctcgcagagccgaccacgaaacacctcccgcgggcgctgttcggcaac
gagatctgggggtcggccacggaacggctcgagcagacgcccttcggccggctcaaacac
tacgtcgagttcctccggctggcccgccactacaccgacgtctacgcggactaccacgac
cacctcgaggccgagcgggcactggacttcgacgaactggtgcggacggcgacggacctg
ctggacgatgacgccgtcgccccggcaatcaccggccagtggacgcaggtctactgtgac
gagttccaagataccgacgcgacccagttttcgttactgaccgaactcaccgacggcccc
gaccggccggacctgctcgcgatcggcgacaaggaccaggccatctacggctggcgcggc
accgaccgcgaggggctcgaccggctggcgacgaccacggccgaccaccgcgggatcgaa
ctcgagctcaacttccgctcgcgacaggaggtcctcgcgctgaccaacgcctgtgactac
gcccaccagtcctcgaagacgctgcgcgaacacggccggaccgaggggacctacgacgag
gccgacccgccggatcgcgtcgtcaaaatcgagagcgacgagattccccagtcgacgccg
gaacaggtcgcgacgacggcctcgcgactcctcaatggagaggcggaaaacgtcccccag
cgctcgcttggcgatctcgcggtcatcgttcgaaccaaccgccacgcgcaggcagtggct
gacgaactccggtcgctgcggatcccctacgaggtgtcgggctcgccgcggggcgaggtc
tcgcccggcctgcagacggcgctgtcgtacctccgggtgctggtcgacccgggcgcggac
gcccacctccggcgcgtgttactctatcggtaccggttctccgagagcgatctggcgacg
ctccagcgacgggacggctcgctgtacgacgccgtgaccgccgccgagccatcggcgctc
gatctcgaggaccccgaccgactcgagacggtccgggaccacctcgcgatcctcgaggag
taccgcgacgtctatccgctgtcggggttcgtgcggcggttcagggacctgacccggctc
gagtggttctgtacgggggaggagcgaagcgagttcgaccgcatcgagcggttcgtcgag
gcctacgaatccgatggggtcgtccagtcgctctcgggggagttcgtggacgcgctcgcg
gcgacgctgcgaagcggcgggggcgaccgtacccgggggagccactcggcggactgcgtc
gacgtgatgacggtccatcaggccaagggactggagttcgacaccgtcctcgtccccttc
ctctcggacgaggagtggtgtgtcgagggcgactacgccgaccgtgcccgggatcgcctg
ctggcggcgacgctcgatgacgacgtcgactcgccgctgacggccgatctggccgccgac
tcggtcgccgaggagtggcgggtcctccacgtcgcactcacccgcgcggcgaatcacctg
ttcctcttcgggtccgagtacgagtacgacccggccgacgggctcgcggccacgaccgcc
gacgcctgtctggccgacgagatcgcgtggtcggtgaccggccggcggatggacctctgg
tcgtcgctgaccgagagcgtcgagcaggtccgggagacctaccccgaaaccgtggtcgac
cgcaccgacgagatcgctgcctcggccggcgagacacccggcacgatcacctactacgcc
ggctacggcgaccgccccatcgaacccctcgagacccgcgaggcggtcgagacggtccac
cgactgggccgacagcttcgccacggctcgttactgcccgtcgccgacgccgcgagccac
ggcggcctcgaggcggacgcggacgggcgggcggtaccgagcggccgccgcccgtcggcg
ctgacgaccgataccgtccgcttccccgtcgagacgctcgcgaccgcgaccgagctgccc
gtcgcgatgcgacacagctactccgcgatggacacccacgagacctgtccgcgcaagcac
tatctcgatcacgtcgttcgggcgttcgacgatccgccggcgacggcggagccggcggac
aggacagtagacgacacggagggaaccgcgacggaaaccgacgacgcggcctctcggctc
gtcggcaccgtcttccacgacgtcgccgaggaggcgttccaccgcgagtacgacggccgc
gaggcctggcgcgaggccgccgtccgccagctcaccgcgcgggacctgctcgaacaccgc
gagcccgtcctcgcctgtatcgatcggtacttcgcggcgactgcgcccgcatacgaccgg
ccggtcgccgactgggaacccctggccgcggaactcccgttttcgctcgaggacgtcgcg
gacgtgagcggggacgtggtcggctacgtcgactcagtccgtcggctccccgacggcggg
ctggccgtgctggactacaaggccaccgccgagcggatcgcgcccgcggacgcggtccag
ttggcactgtatctgcgggcctgcaagcagcggttcgacgacccgatcgccgcggtcggc
tacgtctacgtcggcgacgtcgacgacccccgcgtcgacctgttcgaccccgacgaactg
ccggcctgggagtcggtcctcgagacgctcgcggcggtcgacgagccctcgttcacggag
acgacaccgggcgaccactgccggcactgtccgcaccggtcgctgggctgtggaccggac
gagtggacgccggatacgggtgtttcggacgacgactga
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